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骆驼中的自然杀伤细胞受体基因:另一种哺乳动物模型。

Natural Killer Cell Receptor Genes in Camels: Another Mammalian Model.

作者信息

Futas Jan, Oppelt Jan, Jelinek April, Elbers Jean P, Wijacki Jan, Knoll Ales, Burger Pamela A, Horin Petr

机构信息

Department of Animal Genetics, Faculty of Veterinary Medicine, University of Veterinary and Pharmaceutical Sciences, Brno, Czechia.

RG Animal Immunogenomics, CEITEC-VFU, University of Veterinary and Pharmaceutical Sciences, Brno, Czechia.

出版信息

Front Genet. 2019 Jul 2;10:620. doi: 10.3389/fgene.2019.00620. eCollection 2019.

Abstract

Due to production of special homodimeric heavy chain antibodies, somatic hypermutation of their T-cell receptor genes and unusually low diversity of their major histocompatibility complex genes, camels represent an important model for immunogenetic studies. Here, we analyzed genes encoding selected natural killer cell receptors with a special focus on genes encoding receptors for major histocompatibility complex (MHC) class I ligands in the two domestic camel species, and . Based on the dromedary genome assembly CamDro2, we characterized the genetic contents, organization, and variability of two complex genomic regions, the leukocyte receptor complex and the natural killer complex, along with the natural cytotoxicity receptor genes , , and . The genomic organization of the natural killer complex region of camels differs from cattle, the phylogenetically most closely related species. With its minimal set of genes, it resembles this complex in the domestic pig. Similarly, the leukocyte receptor complex of camels is strikingly different from its cattle counterpart. With pseudogenes and few genes, it seems to be simpler than in the pig. The syntenies and protein sequences of the , , and genes in the dromedary suggest that they could be human orthologues. However, only and have a structure of functional genes, while appears to be a pseudogene. High sequence similarities between the two camel species as well as with the alpaca were observed. The polymorphism in all genes analyzed seems to be generally low, similar to the rest of the camel genomes. This first report on natural killer cell receptor genes in camelids adds new data to our understanding of specificities of the camel immune system and its functions, extends our genetic knowledge of the innate immune variation in dromedaries and Bactrian camels, and contributes to studies of natural killer cell receptors evolution in mammals.

摘要

由于骆驼能产生特殊的同型二聚体重链抗体、其T细胞受体基因发生体细胞超突变且主要组织相容性复合体基因的多样性异常低,骆驼成为免疫遗传学研究的重要模型。在此,我们分析了编码选定自然杀伤细胞受体的基因,特别关注了两种家养骆驼物种中编码主要组织相容性复合体(MHC)I类配体受体的基因。基于单峰骆驼基因组组装CamDro2,我们对两个复杂基因组区域,即白细胞受体复合体和自然杀伤复合体,以及自然细胞毒性受体基因、和的遗传内容、组织和变异性进行了表征。骆驼自然杀伤复合体区域的基因组组织不同于系统发育上关系最密切的物种牛。其基因数量最少,类似于家猪中的这个复合体。同样,骆驼的白细胞受体复合体与其牛的对应物明显不同。有假基因且基因数量少,它似乎比猪中的更简单。单峰骆驼中、和基因的同线性和蛋白质序列表明它们可能是人类的直系同源基因。然而,只有和具有功能基因的结构,而似乎是一个假基因。观察到两种骆驼物种之间以及与羊驼之间有高度的序列相似性。分析的所有基因中的多态性似乎普遍较低,类似于骆驼基因组的其他部分。这篇关于骆驼科动物自然杀伤细胞受体基因的首次报道为我们对骆驼免疫系统特异性及其功能的理解增添了新数据,扩展了我们对单峰骆驼和双峰骆驼先天免疫变异的遗传知识,并有助于哺乳动物自然杀伤细胞受体进化的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/98f5/6614441/fcafcb8e1619/fgene-10-00620-g001.jpg

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