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质粒介导的大肠杆菌在牛和羊分离株中的多粘菌素耐药性和多粘菌素耐药性山梨糖醇发酵性 O157:H7 的全基因组序列。

Plasmid-Mediated Colistin Resistance in O157:H7 Cattle and Sheep Isolates and Whole-Genome Sequence of a Colistin-Resistant Sorbitol Fermentative O157:H7.

机构信息

Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Kirikkale University, Kirikkale, Turkey.

Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Ankara University, Ankara, Turkey.

出版信息

Microb Drug Resist. 2019 Dec;25(10):1497-1506. doi: 10.1089/mdr.2019.0053. Epub 2019 Jul 16.

DOI:10.1089/mdr.2019.0053
PMID:31314669
Abstract

The aims of this study were to investigate the plasmid-mediated colistin resistance genes (, , , , and ), phenotypic colistin resistance in O157:H7/H7 strains isolated from cattle and sheep, and whole-genome sequence (WGS) analysis of colistin-resistant sorbitol fermentative O157:H7. According to the results, 5 of the 49 isolates were found to harbor and/or genes. Three isolates, including a sorbitol fermentative O157:H7, were found phenotypically resistant to colistin with a minimum inhibitory concentration value of 128 μg/mL. The genome of sorbitol fermentative O157:H7 did not show 100% similarity to any of the other genome sequences found in the universal genome database. It has also been determined that this isolate carried 62 different antimicrobial resistance genes. This is the first report of plasmid-mediated and genes carrying O157:H7 from cattle and sheep isolates and WGS of a colistin-resistant sorbitol fermentative O157:H7. Findings of this study indicate that cattle and sheep can be an important source of colistin resistance in O157:H7, and slaughterhouse wastewater might be a significant route for dissemination of the plasmid-mediated colistin genes. Therefore, the use of colistin in veterinary medicine should be restricted to reduce the development of resistance. Also it may be necessary to review the non-sorbitol fermentation-based isolation protocol for not missing the sorbitol fermentative O157:H7 in epidemiological studies.

摘要

本研究旨在调查质粒介导的黏菌素耐药基因(mcr-1、mcr-2、mcr-3、mcr-4 和 mcr-5)、牛和羊源 O157:H7/H7 菌株的表型黏菌素耐药性,以及耐黏菌素的发酵山梨醇 O157:H7 的全基因组序列(WGS)分析。结果显示,49 株分离株中有 5 株携带 mcr-1 和/或 mcr-3 基因。3 株分离株,包括一株发酵山梨醇的 O157:H7,表现出对黏菌素的表型耐药,最小抑菌浓度值为 128μg/mL。发酵山梨醇的 O157:H7 的基因组与通用基因组数据库中发现的任何其他基因组序列均无 100%相似性。此外,该分离株还携带 62 种不同的抗菌药物耐药基因。这是首次报道牛和羊源 O157:H7 携带质粒介导的 mcr-1 和 mcr-3 基因,以及耐黏菌素的发酵山梨醇 O157:H7 的 WGS。本研究结果表明,牛和羊可能是 O157:H7 中黏菌素耐药的重要来源,屠宰场废水可能是质粒介导黏菌素耐药基因传播的重要途径。因此,应限制兽医中黏菌素的使用,以减少耐药性的产生。此外,可能有必要重新审查基于非发酵山梨醇的分离方案,以免在流行病学研究中遗漏发酵山梨醇的 O157:H7。

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