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利用纳米荧光素酶扩展用于植物科学的生物发光报告基因工具包。

Expanding the bioluminescent reporter toolkit for plant science with NanoLUC.

作者信息

Urquiza-García Uriel, Millar Andrew J

机构信息

1SynthSys and School of Biological Sciences, University of Edinburgh, C. H. Waddington Building, King's Buildings, Max Born Crescent, Edinburgh, EH9 3BF Scotland, UK.

2Institute for Molecular Plant Sciences, University of Edinburgh, D. Rutherford Building, King's Buildings, Edinburgh, EH9 3BF UK.

出版信息

Plant Methods. 2019 Jul 8;15:68. doi: 10.1186/s13007-019-0454-4. eCollection 2019.

Abstract

BACKGROUND

Protein data over circadian time scale is scarce for clock transcription factors. Further work in this direction is required for refining quantitative clock models. However, gathering highly resolved dynamics of low-abundance transcription factors has been a major challenge in the field. In this work we provide a new tool that could help this major issue. Bioluminescence is an important tool for gathering data on circadian gene expression. It allows data collection over extended time periods for low signal levels, thanks to a large signal-to-noise ratio. However, the main reporter so far used, firefly luciferase (FLUC), presents some disadvantages for reporting total protein levels. For example, the rapid, post-translational inactivation of this luciferase will result in underestimation of protein numbers. A more stable reporter protein could in principle tackle this issue. We noticed that NanoLUC might fill this gap, given its reported brightness and the stability of both enzyme and substrate. However, no data in plant systems on the circadian time scale had been reported.

RESULTS

We tested NanoLUC activity under different scenarios that will be important for generating highly quantitative data. These include enzyme purification for calibration curves, expression in transient plant systems, stable transgenic plants and time series over circadian time scales. Furthermore, we show that the difference in substrate use between firefly luciferase and NanoLUC allows tracking of two different reporters from the same samples. We show this by exploring the impact of a BOAp:BOA-NanoLUC construct transformed into a Col-0 CCA1p:FLUC background.

CONCLUSIONS

We concluded that NanoLUC reporters are compatible with established instrumentation and protocols for firefly luciferase. Overall, our results provide guidelines for researchers gathering dynamic protein data over different time scales and experimental setups.

摘要

背景

关于生物钟转录因子在昼夜时间尺度上的蛋白质数据非常稀少。为了完善定量生物钟模型,需要在这个方向上进一步开展工作。然而,收集低丰度转录因子的高分辨率动态数据一直是该领域的一项重大挑战。在这项工作中,我们提供了一种可以帮助解决这一重大问题的新工具。生物发光是收集昼夜节律基因表达数据的重要工具。由于信噪比高,它允许在长时间内收集低信号水平的数据。然而,到目前为止使用的主要报告基因萤火虫荧光素酶(FLUC)在报告总蛋白水平方面存在一些缺点。例如,这种荧光素酶的快速翻译后失活会导致蛋白质数量的低估。原则上,一种更稳定的报告蛋白可以解决这个问题。我们注意到,鉴于已报道的亮度以及酶和底物的稳定性,纳米荧光素酶(NanoLUC)可能填补这一空白。然而,尚未有关于植物系统在昼夜时间尺度上的数据报道。

结果

我们在不同场景下测试了NanoLUC活性,这些场景对于生成高度定量的数据非常重要。这些场景包括用于校准曲线的酶纯化、在瞬时植物系统中的表达、稳定转基因植物以及在昼夜时间尺度上的时间序列。此外,我们表明萤火虫荧光素酶和NanoLUC在底物使用上的差异允许从同一样本中追踪两种不同的报告基因。我们通过探索转化到Col-0 CCA1p:FLUC背景中的BOAp:BOA-NanoLUC构建体的影响来证明这一点。

结论

我们得出结论,NanoLUC报告基因与用于萤火虫荧光素酶的既定仪器和方案兼容。总体而言,我们的结果为研究人员在不同时间尺度和实验设置下收集动态蛋白质数据提供了指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d585/6613265/8107206d1666/13007_2019_454_Fig1_HTML.jpg

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