Collaborations Pharmaceuticals, Inc., 840 Main Campus Drive, Lab 3510, Raleigh, North Carolina, 27606, USA.
Icagen, Inc., 4222 Emperor Blvd, Durham, North Carolina, 27703, USA.
Pharm Res. 2019 Jul 22;36(9):137. doi: 10.1007/s11095-019-2671-y.
Pitt Hopkins Syndrome (PTHS) is a rare genetic disorder caused by mutations of a specific gene, transcription factor 4 (TCF4), located on chromosome 18. PTHS results in individuals that have moderate to severe intellectual disability, with most exhibiting psychomotor delay. PTHS also exhibits features of autistic spectrum disorders, which are characterized by the impaired ability to communicate and socialize. PTHS is comorbid with a higher prevalence of epileptic seizures which can be present from birth or which commonly develop in childhood. Attenuated or absent TCF4 expression results in increased translation of peripheral ion channels K7.1 and Na1.8 which triggers an increase in after-hyperpolarization and altered firing properties.
We now describe a high throughput screen (HTS) of 1280 approved drugs and machine learning models developed from this data. The ion channels were expressed in either CHO (K7.1) or HEK293 (Na1.8) cells and the HTS used either Rb efflux (K7.1) or a FLIPR assay (Na1.8).
The HTS delivered 55 inhibitors of K7.1 (4.2% hit rate) and 93 inhibitors of Na1.8 (7.2% hit rate) at a screening concentration of 10 μM. These datasets also enabled us to generate and validate Bayesian machine learning models for these ion channels. We also describe a structure activity relationship for several dihydropyridine compounds as inhibitors of Na1.8.
This work could lead to the potential repurposing of nicardipine or other dihydropyridine calcium channel antagonists as potential treatments for PTHS acting via Na1.8, as there are currently no approved treatments for this rare disorder.
皮特霍普金斯综合征(PTHS)是一种由特定基因(位于 18 号染色体上的转录因子 4(TCF4))突变引起的罕见遗传疾病。PTHS 导致个体出现中度至重度智力残疾,大多数表现为精神运动发育迟缓。PTHS 还表现出自闭症谱系障碍的特征,其特征是沟通和社交能力受损。PTHS 还伴有更高的癫痫发作发病率,这些癫痫发作可能从出生时就存在,也可能在儿童时期常见。TCF4 表达减弱或缺失会导致外周离子通道 K7.1 和 Na1.8 的翻译增加,从而引发后超极化增加和放电特性改变。
我们现在描述了一种高通量筛选(HTS),其中包含 1280 种已批准的药物和从这些数据中开发的机器学习模型。离子通道在 CHO(K7.1)或 HEK293(Na1.8)细胞中表达,HTS 使用 Rb 外排(K7.1)或 FLIPR 测定法(Na1.8)。
在 10 μM 的筛选浓度下,HTS 提供了 55 种 K7.1 的抑制剂(4.2%的命中率)和 93 种 Na1.8 的抑制剂(7.2%的命中率)。这些数据集还使我们能够为这些离子通道生成和验证贝叶斯机器学习模型。我们还描述了几种二氢吡啶化合物作为 Na1.8 抑制剂的构效关系。
这项工作可能导致尼卡地平或其他二氢吡啶钙通道拮抗剂作为治疗 PTHS 的潜在再利用,因为目前尚无针对这种罕见疾病的批准治疗方法。