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RNA 标记:拟南芥中的 m6A 写入器、读取器和功能。

Marking RNA: m6A writers, readers, and functions in Arabidopsis.

机构信息

RNA Biology and Molecular Physiology, Faculty of Biology, Bielefeld University, 33615 Bielefeld, Germany.

出版信息

J Mol Cell Biol. 2019 Oct 25;11(10):899-910. doi: 10.1093/jmcb/mjz085.

DOI:10.1093/jmcb/mjz085
PMID:31336387
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6884701/
Abstract

N6-methyladenosine (m6A) emerges as an important modification in eukaryotic mRNAs. m6A has first been reported in 1974, and its functional significance in mammalian gene regulation and importance for proper development have been well established. An arsenal of writer, eraser, and reader proteins accomplish deposition, removal, and interpretation of the m6A mark, resulting in dynamic function. This led to the concept of an epitranscriptome, the compendium of RNA species with chemical modification of the nucleobases in the cell, in analogy to the epigenome. While m6A has long been known to also exist in plant mRNAs, proteins involved in m6A metabolism have only recently been detected by mutant analysis, homology search, and mRNA interactome capture in the reference plant Arabidopsis thaliana. Dysregulation of the m6A modification causes severe developmental abnormalities of leaves and roots and altered timing of reproductive development. Furthermore, m6A modification affects viral infection. Here, we discuss recent progress in identifying m6A sites transcriptome-wide, in identifying the molecular players involved in writing, removing, and reading the mark, and in assigning functions to this RNA modification in A. thaliana. We highlight similarities and differences to m6A modification in mammals and provide an outlook on important questions that remain to be addressed.

摘要

N6-甲基腺嘌呤(m6A)在真核 mRNA 中是一种重要的修饰。m6A 于 1974 年首次被报道,其在哺乳动物基因调控中的功能意义以及对正常发育的重要性已经得到充分证实。大量的写入器、擦除器和读取器蛋白完成 m6A 标记的沉积、去除和解释,从而实现动态功能。这就产生了一个概念,即转录后修饰组,即细胞中核苷酸碱基化学修饰的 RNA 种类的汇编,类似于表观基因组。虽然 m6A 长期以来一直被认为也存在于植物 mRNA 中,但直到最近,通过突变分析、同源搜索和参考植物拟南芥中的 mRNA 互作组捕获,才检测到参与 m6A 代谢的蛋白。m6A 修饰的失调会导致叶片和根系的严重发育异常,以及生殖发育时间的改变。此外,m6A 修饰还会影响病毒感染。在这里,我们讨论了最近在鉴定全转录组 m6A 位点、鉴定参与标记书写、去除和读取的分子元件以及在拟南芥中为这种 RNA 修饰分配功能方面的进展。我们强调了与哺乳动物中 m6A 修饰的相似性和差异性,并对仍需解决的重要问题进行了展望。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/6884701/7d454f8d6852/mjz085f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/6884701/7d454f8d6852/mjz085f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53cd/6884701/7d454f8d6852/mjz085f1.jpg

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