University of Science and Technology of China, Hefei, 230026, China.
Department of Medical Imaging, Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Sciences, Suzhou, 215163, China.
Med Phys. 2019 Oct;46(10):4520-4530. doi: 10.1002/mp.13733. Epub 2019 Aug 13.
To perform a radiomics analysis with comparisons of multidomain features and a variety of feature selection strategies and classifiers, with the goal of evaluating the value of quantified radiomics method for noninvasively differentiating autoimmune pancreatitis (AIP) from pancreatic ductal adenocarcinoma (PDAC) in F-fluorodeoxglucose positron emission tomography/computed tomography ( F FDG PET/CT) images.
We extracted 251 expert-designed features from 2D and 3D PET/CT images of 111 patients, and recombined these features into five feature sets according to their modalities and dimensions. Among the five feature sets, the optimal one was found leveraging four feature selection strategies and four machine learning classifiers based on the area under the receiver operating characteristic curve (AUC). The feature selection strategies include spearman's rank correlation coefficient, minimum redundancy maximum relevance, support vector machine recursive feature elimination (SVM-RFE), and no feature selection, while the classifiers are random forest, adaptive boosting, support vector machine (SVM) with the Gaussian radial basis function, and SVM with the linear kernel function respectively. Based on the optimal feature set, these feature selection strategies and classifiers were comparatively studied to achieve the best differentiation. Finally, the quantified radiomics prediction model was developed based on the best combination of the feature selection strategy and classifier, and it was compared with two clinical factors based prediction models, and human doctors using nested cross-validation in terms of AUC, accuracy, sensitivity, and specificity.
Comparison experiments demonstrated that CT features and three-dimensional (3D) features performed better than positron emission tomography (PET) features and three-dimensional (2D) features respectively, and multidomain features were superior to single domain features. In addition, the combination of SVM-RFE feature selection strategy and Linear SVM classifier had the highest diagnostic performance (i.e., AUC = 0.93 ± 0.01, ACC = 0.85 ± 0.02, SEN = 0.86 ± 0.03, SPE = 0.84 ± 0.03). The quantified radiomics model developed is significantly superior to both human doctors and clinical factors based prediction models in terms of accuracy and specificity.
Our preliminary results confirmed that the quantified radiomics method could aid the noninvasive differentiation of AIP and PDAC in F FDG PET/CT images and the integration of multidomain features is beneficial for the differentiation.
通过比较多领域特征和多种特征选择策略与分类器,进行放射组学分析,旨在评估定量放射组学方法在 F-氟脱氧葡萄糖正电子发射断层扫描/计算机断层扫描( F-FDG PET/CT)图像中无创鉴别自身免疫性胰腺炎(AIP)与胰腺导管腺癌(PDAC)的价值。
我们从 111 名患者的 2D 和 3D PET/CT 图像中提取了 251 个专家设计的特征,并根据模态和维度将这些特征组合成五个特征集。在这五个特征集中,基于受试者工作特征曲线(AUC)下面积,利用四种特征选择策略和四种机器学习分类器找到最佳特征集。特征选择策略包括 Spearman 秩相关系数、最小冗余最大相关性、支持向量机递归特征消除(SVM-RFE)和无特征选择,分类器分别为随机森林、自适应提升、具有高斯径向基函数的支持向量机(SVM)和具有线性核函数的 SVM。基于最佳特征集,对这些特征选择策略和分类器进行了比较研究,以达到最佳的鉴别效果。最后,基于最佳特征选择策略和分类器的组合,建立了定量放射组学预测模型,并与基于两个临床因素的预测模型以及嵌套交叉验证的人类医生进行了比较,以 AUC、准确率、灵敏度和特异性评估。
对比实验表明,CT 特征和三维(3D)特征优于正电子发射断层扫描(PET)特征和三维(2D)特征,多领域特征优于单一领域特征。此外,SVM-RFE 特征选择策略与线性 SVM 分类器的组合具有最高的诊断性能(即 AUC=0.93±0.01、ACC=0.85±0.02、SEN=0.86±0.03、SPE=0.84±0.03)。与基于人类医生和临床因素的预测模型相比,定量放射组学模型在准确性和特异性方面均具有显著优势。
我们的初步结果证实,定量放射组学方法可辅助 F-FDG PET/CT 图像中 AIP 和 PDAC 的无创鉴别,多领域特征的整合有助于鉴别。