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理解电子供体在 Tsrm 催化的反应中的作用,Tsrm 是一种钴胺素依赖的自由基 S-腺苷甲硫氨酸甲基转移酶。

Understanding the role of electron donors in the reaction catalyzed by Tsrm, a cobalamin-dependent radical S-adenosylmethionine methylase.

机构信息

Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, 16802, USA.

Department of Chemistry, The Pennsylvania State University, University Park, PA, 16802, USA.

出版信息

J Biol Inorg Chem. 2019 Sep;24(6):831-839. doi: 10.1007/s00775-019-01689-8. Epub 2019 Jul 26.

Abstract

The cobalamin-dependent radical S-adenosylmethionine (SAM) enzyme TsrM catalyzes the methylation of C2 of L-tryptophan to form 2-methyltryptophan during the biosynthesis of thiostrepton A. Although TsrM is a member of the radical SAM superfamily, unlike all other annotated members, it does not catalyze a reductive cleavage of SAM to a 5'-deoxyadenosyl 5'-radical intermediate. In fact, it has been proposed that TsrM catalyzes its reaction through two polar nucleophilic displacements, with its cobalamin cofactor cycling directly between methylcobalamin (MeCbl) and cob(I)alamin. Nevertheless, the enzyme has been stated to require the action of a reductant, which can be satisfied by dithiothreitol. By contrast, all other annotated RS enzymes require a reductant that exhibits a much lower reduction potential, which is necessary for the reductive cleavage of SAM. Herein, we show that TsrM can catalyze multiple turnovers in the absence of any reducing agent, but only when it is pre-loaded with MeCbl. When hydroxocobalamin (OHCbl) or cob(II)alamin is bound to TsrM, a reductant is required to convert it to cob(I)alamin, which can acquire a methyl group directly from SAM. Our studies suggest that TsrM uses an external reductant to prime its reaction by converting bound OHCbl or cob(II)alamin to MeCbl, and to regenerate the MeCbl form of the cofactor upon adventitious oxidation of the cob(I)alamin intermediate to cob(II)alamin.

摘要

钴胺素依赖的自由基 S-腺苷甲硫氨酸(SAM)酶 TsrM 在硫链丝菌素 A 的生物合成过程中催化 L-色氨酸的 C2 位甲基化,形成 2-甲基色氨酸。尽管 TsrM 是自由基 SAM 超家族的成员,但与所有其他注释成员不同,它不会催化 SAM 的还原裂解形成 5'-脱氧腺苷 5'-自由基中间体。事实上,有人提出 TsrM 通过两次极性亲核取代来催化其反应,其钴胺素辅因子在甲基钴胺素(MeCbl)和 cob(I)alamin 之间直接循环。然而,该酶已被证明需要还原剂的作用,还原剂可以由二硫苏糖醇(DTT)来满足。相比之下,所有其他注释的 RS 酶都需要一种还原电势低得多的还原剂,这对于 SAM 的还原裂解是必要的。在此,我们表明 TsrM 可以在没有任何还原剂的情况下催化多次周转,但前提是它预先加载了 MeCbl。当羟钴胺素(OHCbl)或 cob(II)alamin 与 TsrM 结合时,需要还原剂将其转化为 cob(I)alamin,后者可以直接从 SAM 获得一个甲基。我们的研究表明,TsrM 使用外部还原剂通过将结合的 OHCbl 或 cob(II)alamin 转化为 MeCbl 来启动其反应,并在 cob(I)alamin 中间体偶然氧化为 cob(II)alamin 时,再生辅因子的 MeCbl 形式。

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