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鉴定和应用与寿命延长相关的基因表达特征。

Identification and Application of Gene Expression Signatures Associated with Lifespan Extension.

机构信息

Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA; Skolkovo Institute of Science and Technology, Moscow 121205, Russia; Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119234, Russia.

Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Cell Metab. 2019 Sep 3;30(3):573-593.e8. doi: 10.1016/j.cmet.2019.06.018. Epub 2019 Jul 25.

Abstract

Several pharmacological, dietary, and genetic interventions that increase mammalian lifespan are known, but general principles of lifespan extension remain unclear. Here, we performed RNA sequencing (RNA-seq) analyses of mice subjected to 8 longevity interventions. We discovered a feminizing effect associated with growth hormone regulation and diminution of sex-related differences. Expanding this analysis to 17 interventions with public data, we observed that many interventions induced similar gene expression changes. We identified hepatic gene signatures associated with lifespan extension across interventions, including upregulation of oxidative phosphorylation and drug metabolism, and showed that perturbed pathways may be shared across tissues. We further applied the discovered longevity signatures to identify new lifespan-extending candidates, such as chronic hypoxia, KU-0063794, and ascorbyl-palmitate. Finally, we developed GENtervention, an app that visualizes associations between gene expression changes and longevity. Overall, this study describes general and specific transcriptomic programs of lifespan extension in mice and provides tools to discover new interventions.

摘要

已知几种能够延长哺乳动物寿命的药理学、饮食和遗传学干预措施,但延长寿命的一般原则仍不清楚。在这里,我们对接受 8 种长寿干预措施的小鼠进行了 RNA 测序(RNA-seq)分析。我们发现了与生长激素调节和减少性别差异相关的女性化效应。将这一分析扩展到具有公共数据的 17 种干预措施,我们观察到许多干预措施诱导了相似的基因表达变化。我们确定了与多种干预措施相关的肝基因特征,包括氧化磷酸化和药物代谢的上调,并表明受干扰的途径可能在组织之间共享。我们进一步应用发现的长寿特征来识别新的延长寿命的候选物,如慢性缺氧、KU-0063794 和抗坏血酸棕榈酸酯。最后,我们开发了 GENtervention,这是一个应用程序,可以可视化基因表达变化与寿命之间的关联。总的来说,这项研究描述了小鼠延长寿命的一般和特定转录组程序,并提供了发现新干预措施的工具。

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