侏儒症、热量限制和雷帕霉素治疗可减缓小鼠肝脏中的表观遗传衰老特征。
Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment.
作者信息
Wang Tina, Tsui Brian, Kreisberg Jason F, Robertson Neil A, Gross Andrew M, Yu Michael Ku, Carter Hannah, Brown-Borg Holly M, Adams Peter D, Ideker Trey
机构信息
Department of Medicine, University of California San Diego, La Jolla, CA, 92093, USA.
Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, 92093, USA.
出版信息
Genome Biol. 2017 Mar 28;18(1):57. doi: 10.1186/s13059-017-1186-2.
BACKGROUND
Global but predictable changes impact the DNA methylome as we age, acting as a type of molecular clock. This clock can be hastened by conditions that decrease lifespan, raising the question of whether it can also be slowed, for example, by conditions that increase lifespan. Mice are particularly appealing organisms for studies of mammalian aging; however, epigenetic clocks have thus far been formulated only in humans.
RESULTS
We first examined whether mice and humans experience similar patterns of change in the methylome with age. We found moderate conservation of CpG sites for which methylation is altered with age, with both species showing an increase in methylome disorder during aging. Based on this analysis, we formulated an epigenetic-aging model in mice using the liver methylomes of 107 mice from 0.2 to 26.0 months old. To examine whether epigenetic aging signatures are slowed by longevity-promoting interventions, we analyzed 28 additional methylomes from mice subjected to lifespan-extending conditions, including Prop1 dwarfism, calorie restriction or dietary rapamycin. We found that mice treated with these lifespan-extending interventions were significantly younger in epigenetic age than their untreated, wild-type age-matched controls.
CONCLUSIONS
This study shows that lifespan-extending conditions can slow molecular changes associated with an epigenetic clock in mice livers.
背景
随着年龄增长,全球范围内可预测的变化会影响DNA甲基化组,其作用类似于一种分子时钟。这种时钟会因缩短寿命的条件而加速,这就引发了一个问题,即它是否也能被减缓,例如通过延长寿命的条件。小鼠是研究哺乳动物衰老的特别有吸引力的生物体;然而,表观遗传时钟迄今为止仅在人类中被制定。
结果
我们首先研究了小鼠和人类甲基化组随年龄变化的模式是否相似。我们发现随着年龄增长甲基化发生改变的CpG位点存在适度的保守性,两个物种在衰老过程中甲基化组紊乱程度均增加。基于此分析,我们利用107只年龄从0.2个月到26.0个月的小鼠的肝脏甲基化组构建了小鼠的表观遗传衰老模型。为了研究表观遗传衰老特征是否会因促进长寿的干预而减缓,我们分析了另外28个来自处于延长寿命条件下的小鼠的甲基化组,这些条件包括Prop1侏儒症、热量限制或饮食雷帕霉素。我们发现接受这些延长寿命干预的小鼠的表观遗传年龄显著低于未接受干预的、年龄匹配的野生型对照。
结论
本研究表明,延长寿命的条件可以减缓小鼠肝脏中与表观遗传时钟相关的分子变化。