• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于生成碳簇C(n = 3 - 6,10)稳定结构的改进粒子群优化算法

Modified Particle Swarm Optimization Algorithms for the Generation of Stable Structures of Carbon Clusters, C ( = 3-6, 10).

作者信息

Jana Gourhari, Mitra Arka, Pan Sudip, Sural Shamik, Chattaraj Pratim K

机构信息

Department of Chemistry and Centre for Theoretical Studies, Indian Institute of Technology, Kharagpur, India.

Department of Electronics and Electrical Communication Engineering, Indian Institute of Technology, Kharagpur, India.

出版信息

Front Chem. 2019 Jul 12;7:485. doi: 10.3389/fchem.2019.00485. eCollection 2019.

DOI:10.3389/fchem.2019.00485
PMID:31355182
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6640203/
Abstract

Particle Swarm Optimization (PSO), a population based technique for stochastic search in a multidimensional space, has so far been employed successfully for solving a variety of optimization problems including many multifaceted problems, where other popular methods like steepest descent, gradient descent, conjugate gradient, Newton method, etc. do not give satisfactory results. Herein, we propose a modified PSO algorithm for unbiased global minima search by integrating with density functional theory which turns out to be superior to the other evolutionary methods such as simulated annealing, basin hopping and genetic algorithm. The present PSO code combines evolutionary algorithm with a variational optimization technique through interfacing of PSO with the Gaussian software, where the latter is used for single point energy calculation in each iteration step of PSO. Pure carbon and carbon containing systems have been of great interest for several decades due to their important role in the evolution of life as well as wide applications in various research fields. Our study shows how arbitrary and randomly generated small C clusters ( = 3-6, 10) can be transformed into the corresponding global minimum structure. The detailed results signify that the proposed technique is quite promising in finding the best global solution for small population size clusters.

摘要

粒子群优化算法(PSO)是一种用于多维空间随机搜索的基于种群的技术,迄今为止已成功应用于解决各种优化问题,包括许多其他流行方法(如最速下降法、梯度下降法、共轭梯度法、牛顿法等)无法给出满意结果的多方面问题。在此,我们提出一种改进的PSO算法,通过与密度泛函理论相结合进行无偏全局极小值搜索,结果表明该算法优于模拟退火、盆地跳跃和遗传算法等其他进化方法。当前的PSO代码通过PSO与高斯软件的接口,将进化算法与变分优化技术相结合,其中高斯软件用于PSO每次迭代步骤中的单点能量计算。几十年来,纯碳及含碳体系因其在生命演化中的重要作用以及在各个研究领域的广泛应用而备受关注。我们的研究展示了任意随机生成的小碳簇(=3 - 6, 10)如何转变为相应的全局最小结构。详细结果表明,所提出的技术在为小种群规模簇寻找最佳全局解方面颇具前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1274/6640203/ca2993174d9d/fchem-07-00485-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1274/6640203/c13479c8215e/fchem-07-00485-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1274/6640203/ca2993174d9d/fchem-07-00485-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1274/6640203/c13479c8215e/fchem-07-00485-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1274/6640203/ca2993174d9d/fchem-07-00485-g0002.jpg

相似文献

1
Modified Particle Swarm Optimization Algorithms for the Generation of Stable Structures of Carbon Clusters, C ( = 3-6, 10).用于生成碳簇C(n = 3 - 6,10)稳定结构的改进粒子群优化算法
Front Chem. 2019 Jul 12;7:485. doi: 10.3389/fchem.2019.00485. eCollection 2019.
2
Global minimum structure searches via particle swarm optimization.通过粒子群优化进行全局最小结构搜索。
J Comput Chem. 2007 May;28(7):1177-86. doi: 10.1002/jcc.20621.
3
Particle swarm optimization-based automatic parameter selection for deep neural networks and its applications in large-scale and high-dimensional data.基于粒子群优化的深度神经网络自动参数选择及其在大规模和高维数据中的应用。
PLoS One. 2017 Dec 13;12(12):e0188746. doi: 10.1371/journal.pone.0188746. eCollection 2017.
4
Evaluation of a particle swarm algorithm for biomechanical optimization.一种用于生物力学优化的粒子群算法的评估
J Biomech Eng. 2005 Jun;127(3):465-74. doi: 10.1115/1.1894388.
5
An improved predator-prey particle swarm optimization algorithm for Nash equilibrium solution.改进的纳什均衡求解捕食者-猎物粒子群优化算法。
PLoS One. 2021 Nov 24;16(11):e0260231. doi: 10.1371/journal.pone.0260231. eCollection 2021.
6
Strength Pareto particle swarm optimization and hybrid EA-PSO for multi-objective optimization.基于强度 Pareto 粒子群优化和混合 EA-PSO 的多目标优化算法。
Evol Comput. 2010 Spring;18(1):127-56. doi: 10.1162/evco.2010.18.1.18105.
7
An improved particle swarm optimization combined with double-chaos search.一种结合双混沌搜索的改进粒子群优化算法。
Math Biosci Eng. 2023 Jul 28;20(9):15737-15764. doi: 10.3934/mbe.2023701.
8
Heuristic-based tabu search algorithm for folding two-dimensional AB off-lattice model proteins.基于启发式的禁忌搜索算法用于折叠二维 AB 无格模型蛋白质。
Comput Biol Chem. 2013 Dec;47:142-8. doi: 10.1016/j.compbiolchem.2013.08.011. Epub 2013 Sep 8.
9
A Novel Particle Swarm Optimization Algorithm for Global Optimization.一种用于全局优化的新型粒子群优化算法。
Comput Intell Neurosci. 2016;2016:9482073. doi: 10.1155/2016/9482073. Epub 2016 Jan 21.
10
Multi-swarm UPSO algorithm based on seed strategy for atomic clusters structure optimization.基于种子策略的多群 UPSO 算法在原子团簇结构优化中的应用。
Comput Biol Chem. 2021 Dec;95:107598. doi: 10.1016/j.compbiolchem.2021.107598. Epub 2021 Nov 2.

引用本文的文献

1
Tuning Reinforcement Learning Parameters for Cluster Selection to Enhance Evolutionary Algorithms.调整强化学习参数以进行聚类选择以增强进化算法
ACS Eng Au. 2024 Apr 16;4(4):381-393. doi: 10.1021/acsengineeringau.3c00068. eCollection 2024 Aug 21.
2
Atomic Clusters: Structure, Reactivity, Bonding, and Dynamics.原子团簇:结构、反应性、键合与动力学
Front Chem. 2021 Aug 16;9:730548. doi: 10.3389/fchem.2021.730548. eCollection 2021.
3
Search for Global Minimum Structures of ( = 1-15) Using xTB-Based Basin-Hopping Algorithm.

本文引用的文献

1
Particle Swarm Optimization for Single Objective Continuous Space Problems: A Review.单目标连续空间问题的粒子群优化算法综述
Evol Comput. 2017 Spring;25(1):1-54. doi: 10.1162/EVCO_r_00180. Epub 2016 Mar 8.
2
Feature selection with harmony search.基于和声搜索的特征选择
IEEE Trans Syst Man Cybern B Cybern. 2012 Dec;42(6):1509-23. doi: 10.1109/TSMCB.2012.2193613. Epub 2012 May 23.
3
Adaptive particle swarm optimization.自适应粒子群优化算法
使用基于xTB的盆地跳跃算法搜索(= 1 - 15)的全局最小结构。
Front Chem. 2021 Jul 26;9:694156. doi: 10.3389/fchem.2021.694156. eCollection 2021.
IEEE Trans Syst Man Cybern B Cybern. 2009 Dec;39(6):1362-81. doi: 10.1109/TSMCB.2009.2015956. Epub 2009 Apr 7.
4
Highly compressed ammonia forms an ionic crystal.高度压缩的氨形成离子晶体。
Nat Mater. 2008 Oct;7(10):775-9. doi: 10.1038/nmat2261. Epub 2008 Aug 24.
5
A dynamic lattice searching method with interior operation for unbiased optimization of large Lennard-Jones clusters.一种用于大尺寸 Lennard-Jones 团簇无偏优化的带内部操作的动态晶格搜索方法。
J Comput Chem. 2008 Aug;29(11):1772-9. doi: 10.1002/jcc.20938.
6
Particle swarm optimization with recombination and dynamic linkage discovery.基于重组与动态链接发现的粒子群优化算法
IEEE Trans Syst Man Cybern B Cybern. 2007 Dec;37(6):1460-70. doi: 10.1109/tsmcb.2007.904019.
7
Optimization by simulated annealing.模拟退火优化。
Science. 1983 May 13;220(4598):671-80. doi: 10.1126/science.220.4598.671.
8
Detection of C5 in the Circumstellar Shell of IRC+10216.IRC+10216 星周壳中 C5 的探测。
Science. 1989 May 5;244(4904):562-4. doi: 10.1126/science.244.4904.562.
9
Global minimum structure searches via particle swarm optimization.通过粒子群优化进行全局最小结构搜索。
J Comput Chem. 2007 May;28(7):1177-86. doi: 10.1002/jcc.20621.
10
A multiobjective memetic algorithm based on particle swarm optimization.一种基于粒子群优化的多目标文化算法。
IEEE Trans Syst Man Cybern B Cybern. 2007 Feb;37(1):42-50. doi: 10.1109/tsmcb.2006.883270.