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全球变化导致的陆上生境利用对北极熊粪便微生物群有影响。

Global change-driven use of onshore habitat impacts polar bear faecal microbiota.

机构信息

School of Biosciences, Cardiff University, The Sir Martin Evans Building, Museum Avenue, Cardiff, UK.

Department of Biodiversity and Molecular Ecology, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all' Adige, TN, Italy.

出版信息

ISME J. 2019 Dec;13(12):2916-2926. doi: 10.1038/s41396-019-0480-2. Epub 2019 Aug 5.

Abstract

The gut microbiota plays a critical role in host health, yet remains poorly studied in wild species. Polar bears (Ursus maritimus), key indicators of Arctic ecosystem health and environmental change, are currently affected by rapid shifts in habitat that may alter gut homeostasis. Declining sea ice has led to a divide in the southern Beaufort Sea polar bear subpopulation such that an increasing proportion of individuals now inhabit onshore coastal regions during the open-water period ('onshore bears') while others continue to exhibit their typical behaviour of remaining on the ice ('offshore bears'). We propose that bears that have altered their habitat selection in response to climate change will exhibit a distinct gut microbiota diversity and composition, which may ultimately have important consequences for their health. Here, we perform the first assessment of abundance and diversity in the faecal microbiota of wild polar bears using 16S rRNA Illumina technology. We find that bacterial diversity is significantly higher in onshore bears compared to offshore bears. The most enriched OTU abundance in onshore bears belonged to the phylum Proteobacteria, while the most depleted OTU abundance within onshore bears was seen in the phylum Firmicutes. We conclude that climate-driven changes in polar bear land use are associated with distinct microbial communities. In doing so, we present the first case of global change mediated alterations in the gut microbiota of a free-roaming wild animal.

摘要

肠道微生物群在宿主健康中起着关键作用,但在野生物种中的研究仍不完善。北极熊(Ursus maritimus)是北极生态系统健康和环境变化的关键指标,它们目前受到栖息地快速变化的影响,这种变化可能会改变肠道内环境的稳定。不断减少的海冰导致了南波弗特海北极熊亚群的分裂,越来越多的个体现在在开阔水域期间栖息在沿海地区(“上岸熊”),而其他个体则继续表现出留在冰上的典型行为(“离岸熊”)。我们提出,那些为了应对气候变化而改变了栖息地选择的熊类,其肠道微生物多样性和组成将表现出明显的差异,这可能最终对它们的健康产生重要影响。在这里,我们使用 16S rRNA Illumina 技术,首次评估了野生北极熊粪便微生物群中的丰度和多样性。我们发现,与离岸熊相比,上岸熊的细菌多样性显著更高。上岸熊中最丰富的 OTU 丰度属于变形菌门,而在岸上熊中最稀缺的 OTU 丰度则出现在厚壁菌门。我们的结论是,北极熊土地利用的气候变化与独特的微生物群落有关。通过这样做,我们提出了首例全球变化介导的自由漫游野生动物肠道微生物群改变的案例。

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