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三种星形细菌——湿地之星菌、液泡之星菌和星形菌属ATCC 35155的全基因组序列

Complete Genome Sequences of Three Star-Shaped Bacteria, Stella humosa, Stella vacuolata, and Stella Species ATCC 35155.

作者信息

Shibai Atsushi, Maeda Tomoya, Kawada Masako, Kotani Hazuki, Sakata Natsue, Furusawa Chikara

机构信息

Center for Biosystems Dynamics Research (BDR), RIKEN, Suita, Osaka, Japan.

Center for Biosystems Dynamics Research (BDR), RIKEN, Suita, Osaka, Japan

出版信息

Microbiol Resour Announc. 2019 Aug 8;8(32):e00719-19. doi: 10.1128/MRA.00719-19.

DOI:10.1128/MRA.00719-19
PMID:31395645
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6687932/
Abstract

species are unique star-shaped alphaproteobacteria found in various environments. We report the complete genome sequences of three strains, ATCC 43930, ATCC 43931, and species ATCC 35155. These are the first complete genome sequences of members of the genus .

摘要

该物种是在各种环境中发现的独特的星形α-变形菌。我们报告了三株菌株ATCC 43930、ATCC 43931以及该物种ATCC 35155的完整基因组序列。这些是该属成员的首批完整基因组序列。

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Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
2
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器:从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
3
Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu:通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
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Genome Biol. 2015 Dec 29;16:294. doi: 10.1186/s13059-015-0849-0.
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