Chinali G, Nyssen E, Di Giambattista M, Cocito C
Istituto di Strutture Biologiche ed Ultrastruttura Cellulare, Ila Facoltà di Medicina, Università di Napoli, Italy.
Biochim Biophys Acta. 1988 Nov 10;951(1):42-52. doi: 10.1016/0167-4781(88)90023-1.
Erythromycin (a 14-membered macrolide) and virginiamycin S (a type B synergimycin) block protein biosynthesis in bacteria, but are virtually inactive on poly(U)-directed poly(Phe) synthesis. We have recently shown, however, that these antibiotics inhibit the in vitro polypeptide synthesis directed by synthetic copolymers: this effect is analyzed further in the present work. We were unable to find any consistent alteration produced by these antibiotics on coupled and uncoupled EF-G- and EF-Tu-dependent GTPases, on the EF-Tu-directed binding of aminoacyl-tRNA to ribosomes, and on the EF-G- and GTP-mediated translocation of peptidyl-tRNA bound to poly(U,C).ribosome complexes. With these complexes, the peptidyl transfer reaction, as measured by peptidylpuromycin synthesis, was 10-30% inhibited by virginiamycin S and erythromycin. A direct relationship between the virginiamycin S- and erythromycin-promoted inhibition of poly(A,C)-directed polypeptide synthesis, on the one hand, and the EF-G concentration and the rate of the polymerization reaction, on the other hand, was observed, in agreement with a postulated reversible inhibitor action of these antibiotics. The increased inhibitory activity, which was observed during the first 4-6 rounds of elongation, in the presence of virginiamycin S or erythromycin, was suggestive of a specific action of these antibiotics on the correct positioning of peptidyl-tRNA at the P site. The marked stimulation of premature release of peptidyl-tRNA from poly(A,C).ribosome complexes can be referred to an altered interaction of the C-terminal aminoacyl residue of the growing peptidyl chain with the ribosome. We conclude that the action of virginiamycin S and erythromycin entails a template-dependent alteration of the interaction of peptidyl-tRNA with the donor site of peptidyltransferase, which may lead to a transient functional block of the ribosome and in some instances to a premature release of peptidyl-tRNA and termination of the elongation process.
红霉素(一种14元大环内酯)和维吉尼亚霉素S(一种B型协同霉素)可阻断细菌中的蛋白质生物合成,但对聚(U)指导的聚(苯丙氨酸)合成几乎没有活性。然而,我们最近发现,这些抗生素可抑制由合成共聚物指导的体外多肽合成:在本研究中对这种效应进行了进一步分析。我们未能发现这些抗生素对偶联和未偶联的EF-G和EF-Tu依赖性GTP酶、对EF-Tu指导的氨酰基-tRNA与核糖体的结合以及对EF-G和GTP介导的与聚(U,C)·核糖体复合物结合的肽基-tRNA的易位产生任何一致的改变。对于这些复合物,通过肽基嘌呤霉素合成测定的肽基转移反应,被维吉尼亚霉素S和红霉素抑制了10%-30%。一方面观察到维吉尼亚霉素S和红霉素对聚(A,C)指导的多肽合成的促进抑制作用与EF-G浓度和聚合反应速率之间存在直接关系,这与这些抗生素假定的可逆抑制剂作用一致。在存在维吉尼亚霉素S或红霉素的情况下,在伸长的前4-6轮中观察到的抑制活性增加,提示这些抗生素对肽基-tRNA在P位点的正确定位具有特异性作用。聚(A,C)·核糖体复合物中肽基-tRNA过早释放的显著刺激可归因于正在生长的肽基链的C末端氨酰基残基与核糖体相互作用的改变。我们得出结论,维吉尼亚霉素S和红霉素的作用导致肽基-tRNA与肽基转移酶供体位点相互作用的模板依赖性改变,这可能导致核糖体的短暂功能阻断,在某些情况下导致肽基-tRNA过早释放和伸长过程终止。