p53 Laboratory Technology Development Group, A*STAR, 8A Biomedical Grove #06-06 Immunos, Singapore, 138648, Singapore.
Genome Institute of Singapore, 60 Biopolis Street, Genome, #02-01, Singapore, 138672, Singapore.
Microb Cell Fact. 2019 Aug 19;18(1):139. doi: 10.1186/s12934-019-1185-y.
Acrylic acid (AA) is a widely used commodity chemical derived from non-renewable fossil fuel sources. Alternative microbial-based production methodologies are being developed with the aim of providing "green" acrylic acid. These initiatives will benefit from component sensing tools that facilitate rapid and easy detection of in vivo AA production.
We developed a novel transcriptional sensor facilitating in vivo detection of acrylic acid (AA). RNAseq analysis of Escherichia coli exposed to sub-lethal doses of acrylic acid identified a selectively responsive promoter (P) that was cloned upstream of the eGFP gene. In the presence of AA, eGFP expression in E. coli cells harbouring the sensing construct was readily observable by fluorescence read-out. Low concentrations of AA (500 μM) could be detected whilst the closely related lactic and 3-hydroxy propionic acids failed to activate the sensor. We further used the developed AA-biosensor for in vivo FACS-based screening and identification of amidase mutants with improved catalytic properties for deamination of acrylamide to acrylic acid.
The transcriptional AA sensor developed in this study will benefit strain, enzyme and pathway engineering initiatives targeting the efficient formation of bio-acrylic acid.
丙烯酸(AA)是一种广泛使用的商品化学品,来源于不可再生的化石燃料。目前正在开发替代的基于微生物的生产方法,旨在提供“绿色”丙烯酸。这些举措将受益于组件感应工具,这些工具可方便快捷地检测体内 AA 的生产。
我们开发了一种新型的转录传感器,可方便地在体内检测丙烯酸(AA)。将亚致死剂量的丙烯酸暴露于大肠杆菌的 RNAseq 分析确定了一个选择性响应的启动子(P),该启动子被克隆在 eGFP 基因的上游。在含有感应构建体的大肠杆菌细胞中,AA 的存在可通过荧光读取轻易观察到 eGFP 的表达。可以检测到低浓度的 AA(500 μM),而相关的乳酸和 3-羟基丙酸则不能激活传感器。我们进一步利用开发的 AA 生物传感器,通过基于流式细胞术的筛选,鉴定出具有改进的催化性能的 amidase 突变体,可将丙烯酰胺脱氨转化为丙烯酸。
本研究开发的转录 AA 传感器将有利于针对生物丙烯酸高效形成的菌株、酶和途径工程举措。