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学习具有混合数据类型的高维有向无环图

Learning High-dimensional Directed Acyclic Graphs with Mixed Data-types.

作者信息

Andrews Bryan, Ramsey Joseph, Cooper Gregory F

机构信息

Intelligent Systems Program, University of Pittsburgh, Pittsburgh, PA 15260, USA.

Department of Philosophy, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

出版信息

Proc Mach Learn Res. 2019 Aug;104:4-21.

PMID:31453569
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6709674/
Abstract

In recent years, great strides have been made for causal structure learning in the high-dimensional setting and in the mixed data-type setting when there are both discrete and continuous variables. However, due to the complications involved with modeling continuous-discrete variable interactions, the intersection of these two settings has been relatively understudied. The current paper explores the problem of efficiently extending causal structure learning algorithms to high-dimensional data with mixed data-types. First, we characterize a model over continuous and discrete variables. Second, we derive a degenerate Gaussian (DG) score for mixed data-types and discuss its asymptotic properties. Lastly, we demonstrate the practicality of the DG score on learning causal structures from simulated data sets.

摘要

近年来,在高维环境以及存在离散和连续变量的混合数据类型环境下,因果结构学习取得了长足进展。然而,由于对连续-离散变量交互进行建模存在复杂性,这两种环境的交叉领域相对较少受到研究。本文探讨了将因果结构学习算法有效扩展到具有混合数据类型的高维数据的问题。首先,我们刻画了一个关于连续和离散变量的模型。其次,我们推导出了混合数据类型的退化高斯(DG)分数,并讨论了其渐近性质。最后,我们通过模拟数据集展示了DG分数在学习因果结构方面的实用性。

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本文引用的文献

1
Evaluation of Causal Structure Learning Methods on Mixed Data Types.混合数据类型下因果结构学习方法的评估
Proc Mach Learn Res. 2018 Aug;92:48-65.
2
Mixed graphical models for integrative causal analysis with application to chronic lung disease diagnosis and prognosis.混合图形模型在综合因果分析中的应用,及其在慢性肺部疾病诊断和预后中的应用。
Bioinformatics. 2019 Apr 1;35(7):1204-1212. doi: 10.1093/bioinformatics/bty769.
3
Scoring Bayesian Networks of Mixed Variables.混合变量的贝叶斯网络评分
Int J Data Sci Anal. 2018 Aug;6(1):3-18. doi: 10.1007/s41060-017-0085-7. Epub 2018 Jan 11.
4
A million variables and more: the Fast Greedy Equivalence Search algorithm for learning high-dimensional graphical causal models, with an application to functional magnetic resonance images.数百万甚至更多的变量:用于学习高维图形因果模型的快速贪婪等价搜索算法,并应用于功能磁共振成像。
Int J Data Sci Anal. 2017 Mar;3(2):121-129. doi: 10.1007/s41060-016-0032-z. Epub 2016 Dec 1.