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Genome-wide meta-analysis of depression identifies 102 independent variants and highlights the importance of the prefrontal brain regions.全基因组荟萃分析抑郁症鉴定出 102 个独立变异,并强调了前额叶脑区的重要性。
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What do DNA methylation studies tell us about depression? A systematic review.DNA 甲基化研究告诉了我们关于抑郁症的什么?一项系统性综述。
Transl Psychiatry. 2019 Feb 4;9(1):68. doi: 10.1038/s41398-019-0412-y.
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Combination of Genetic Variation and G72 Protein Level to Detect Schizophrenia: Machine Learning Approaches.基因变异与G72蛋白水平相结合用于检测精神分裂症:机器学习方法
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A Deep Learning Approach for Predicting Antidepressant Response in Major Depression Using Clinical and Genetic Biomarkers.一种利用临床和基因生物标志物预测重度抑郁症抗抑郁反应的深度学习方法。
Front Psychiatry. 2018 Jul 6;9:290. doi: 10.3389/fpsyt.2018.00290. eCollection 2018.
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Progress in Epigenetics of Depression.抑郁症的表观遗传学进展。
Prog Mol Biol Transl Sci. 2018;157:41-66. doi: 10.1016/bs.pmbts.2017.12.011. Epub 2018 Apr 10.
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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression.全基因组关联分析确定了 44 个风险变异,并完善了重度抑郁症的遗传结构。
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Genome-wide association study of depression phenotypes in UK Biobank identifies variants in excitatory synaptic pathways.全基因组关联研究鉴定了 UK Biobank 中抑郁症表型的兴奋性突触通路中的变异。
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FoxO1, A2M, and TGF-β1: three novel genes predicting depression in gene X environment interactions are identified using cross-species and cross-tissues transcriptomic and miRNomic analyses.FoxO1、A2M 和 TGF-β1:通过跨物种和跨组织的转录组学和 miRNA 组学分析,确定了三个预测基因 X 环境相互作用中抑郁症的新基因。
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Genome-wide gene-environment interaction in depression: A systematic evaluation of candidate genes: The childhood trauma working-group of PGC-MDD.抑郁症全基因组基因-环境相互作用:候选基因的系统评估:精神疾病基因组学联盟-重度抑郁症童年创伤工作组
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表观遗传学与抑郁症:最新进展

Epigenetics and Depression: An Update.

作者信息

Lin Eugene, Tsai Shih-Jen

机构信息

Department of Biostatistics, University of Washington, Seattle, WA , USA.

Department of Electrical & Computer Engineering, University of Washington, Seattle, WA, USA.

出版信息

Psychiatry Investig. 2019 Sep;16(9):654-661. doi: 10.30773/pi.2019.07.17.2. Epub 2019 Aug 29.

DOI:10.30773/pi.2019.07.17.2
PMID:31455063
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6761788/
Abstract

OBJECTIVE

Depression is associated with various environmental risk factors such as stress, childhood maltreatment experiences, and stressful life events. Current approaches to assess the pathophysiology of depression, such as epigenetics and gene-environment (GxE) interactions, have been widely leveraged to determine plausible markers, genes, and variants for the risk of developing depression.

METHODS

We focus on the most recent developments for genomic research in epigenetics and GxE interactions.

RESULTS

In this review, we first survey a variety of association studies regarding depression with consideration of GxE interactions. We then illustrate evidence of epigenetic mechanisms such as DNA methylation, microRNAs, and histone modifications to influence depression in terms of animal models and human studies. Finally, we highlight their limitations and future directions.

CONCLUSION

In light of emerging technologies in artificial intelligence and machine learning, future research in epigenetics and GxE interactions promises to achieve novel innovations that may lead to disease prevention and future potential therapeutic treatments for depression.

摘要

目的

抑郁症与多种环境风险因素相关,如压力、童年虐待经历和应激性生活事件。目前评估抑郁症病理生理学的方法,如表观遗传学和基因-环境(GxE)相互作用,已被广泛用于确定抑郁症发病风险的合理标志物、基因和变体。

方法

我们关注表观遗传学和GxE相互作用方面基因组研究的最新进展。

结果

在本综述中,我们首先考虑GxE相互作用,调查了各种关于抑郁症的关联研究。然后,我们从动物模型和人体研究的角度,阐述了DNA甲基化、微小RNA和组蛋白修饰等表观遗传机制影响抑郁症的证据。最后,我们强调了它们的局限性和未来方向。

结论

鉴于人工智能和机器学习领域的新兴技术,表观遗传学和GxE相互作用的未来研究有望实现新的创新,从而可能带来疾病预防以及抑郁症未来潜在的治疗方法。