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真核生物5S核糖体RNA结构中表达进化变化位点的研究。

Studies on the sites expressing evolutionary changes in the structure of eukaryotic 5S ribosomal RNA.

作者信息

Qi G R, Cao G J, Jiang P, Feng X L, Gu X R

机构信息

Shanghai Institute of Biochemistry, Academia Sinica, China.

出版信息

J Mol Evol. 1988;27(4):336-40. doi: 10.1007/BF02101196.

DOI:10.1007/BF02101196
PMID:3146644
Abstract

We have determined the complete sequences of 5S rRNAs from a lamprey (Lampetra reissneri), a lancelet (Branchiostoma belcheri), silkworms (Philosamia cynthia ricini, Bombyx mori, Antheraea pernyi), and a silkworm hybrid (artificially fertilized hybrid species of Philosamia cynthia ricini male x Bombyx mori female), as well as those of cotton seeds (Gossypium hirsutum L.). Having compared more than 170 eukaryotic 5S rRNAs of which seven sequences have been determined by our group as mentioned above, we have found that the "evolutionary sites" that exist at special locations in these structures are closely related to the evolution of eukaryotes. The changes proceed step by step in an orderly way, i.e., the change in nucleotide residues of the "evolutionary sites" depends on the order of the evolution of the species and shows group-specific patterns.

摘要

我们已经测定了七鳃鳗(雷氏七鳃鳗)、文昌鱼(白氏文昌鱼)、蚕(蓖麻蚕、家蚕、柞蚕)以及一种蚕杂交种(蓖麻蚕雄×家蚕雌人工授精杂交种)的5S rRNA完整序列,还有棉籽(陆地棉)的5S rRNA完整序列。在比较了170多种真核生物的5S rRNA后(其中七条序列如上文所述由我们小组测定),我们发现这些结构中特定位置存在的“进化位点”与真核生物的进化密切相关。这些变化以有序的方式逐步进行,即“进化位点”核苷酸残基的变化取决于物种的进化顺序,并呈现出特定群体的模式。

相似文献

1
Studies on the sites expressing evolutionary changes in the structure of eukaryotic 5S ribosomal RNA.真核生物5S核糖体RNA结构中表达进化变化位点的研究。
J Mol Evol. 1988;27(4):336-40. doi: 10.1007/BF02101196.
2
5S RNA sequence from the Philosamia silkworm: evidence for variable evolutionary rates in insect 5S RNA.樗蚕5S RNA序列:昆虫5S RNA进化速率可变的证据。
Nucleic Acids Res. 1982 Sep 25;10(18):5711-6. doi: 10.1093/nar/10.18.5711.
3
Exceptionally high and diverse mutation rates in insects small rRNA.昆虫小核糖体RNA中异常高且多样的突变率。
Sci Sin B. 1985 Oct;28(10):1060-3.
4
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Nucleic Acids Res. 1982 Oct 25;10(20):6383-7. doi: 10.1093/nar/10.20.6383.
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Compilation of 5S rRNA and 5S rRNA gene sequences.5S核糖体RNA及5S核糖体RNA基因序列的汇编
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A unique type of eubacterial 5S rRNA in members of the order Planctomycetales.浮霉菌目成员中一种独特类型的真细菌5S核糖体RNA。
J Mol Evol. 1988;27(2):121-5. doi: 10.1007/BF02138371.
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Compilation of 5S rRNA and 5S rRNA gene sequences.5S核糖体RNA和5S核糖体RNA基因序列的汇编
Nucleic Acids Res. 1990 Apr 25;18 Suppl(Suppl):2215-30. doi: 10.1093/nar/18.suppl.2215.
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Nucleotide sequences and evolutional aspect of 5S ribosomal RNAs from Lingula and silkworm.舌形贝和家蚕5S核糖体RNA的核苷酸序列及进化方面
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Nucleotide sequences of Cyanophora paradoxa cellular and cyanelle-associated 5S ribosomal RNAs: the cyanelle as a potential intermediate in plastid evolution.蓝氏贾第虫细胞及蓝小体相关5S核糖体RNA的核苷酸序列:作为质体进化中潜在中间体的蓝小体
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引用本文的文献

1
Molecular organization of 5S rDNAs in Rajidae (Chondrichthyes): Structural features and evolution of piscine 5S rRNA genes and nontranscribed intergenic spacers.鳐科(软骨鱼纲)5S核糖体DNA的分子组织:鱼类5S核糖体RNA基因和非转录间隔区的结构特征与进化
J Mol Evol. 2006 May;62(5):564-74. doi: 10.1007/s00239-005-0118-z. Epub 2006 Apr 11.

本文引用的文献

1
Nucleotide sequence of 5S ribosomal RNA from the posterior silk glands of Bombyx mori.家蚕后部丝腺5S核糖体RNA的核苷酸序列。
J Biochem. 1981 Mar;89(3):717-22. doi: 10.1093/oxfordjournals.jbchem.a133251.
2
Generalized structures of the 5S ribosomal RNAs.5S核糖体RNA的通用结构
Nucleic Acids Res. 1982 Nov 25;10(22):7323-44. doi: 10.1093/nar/10.22.7323.
3
5S RNA sequence from the Philosamia silkworm: evidence for variable evolutionary rates in insect 5S RNA.樗蚕5S RNA序列:昆虫5S RNA进化速率可变的证据。
Nucleic Acids Res. 1982 Sep 25;10(18):5711-6. doi: 10.1093/nar/10.18.5711.
4
Conservation of secondary structure in 5 S ribosomal RNA: a uniform model for eukaryotic, eubacterial, archaebacterial and organelle sequences is energetically favourable.5S核糖体RNA二级结构的保守性:真核生物、真细菌、古细菌和细胞器序列的统一模型在能量上是有利的。
Biochimie. 1982 May;64(5):311-29. doi: 10.1016/s0300-9084(82)80436-7.
5
The nucleotide sequences of 5S rRNAs from two ribbon worms: Emplectonema gracile contains two 5S rRNA species differing considerably in their sequences.两种纽虫的5S核糖体RNA的核苷酸序列:细弱缠缘纽虫含有两种5S核糖体RNA,它们的序列差异很大。
Nucleic Acids Res. 1983 Oct 25;11(20):7141-4. doi: 10.1093/nar/11.20.7141.
6
Phy M: an RNase activity specific for U and A residues useful in RNA sequence analysis.核酸酶M:一种对U和A残基具有特异性的核糖核酸酶活性,在RNA序列分析中有用。
Nucleic Acids Res. 1980 Jul 25;8(14):3133-42. doi: 10.1093/nar/8.14.3133.
7
Collection of published 5S, 5.8S and 4.5S ribosomal RNA sequences.已发表的5S、5.8S和4.5S核糖体RNA序列的收集。
Nucleic Acids Res. 1985;13 Suppl(Suppl):r105-53. doi: 10.1093/nar/13.suppl.r105.
8
Differentiation of oocyte- and somatic-type 5S rRNAs in animals.
J Biochem. 1986 Aug;100(2):369-74. doi: 10.1093/oxfordjournals.jbchem.a121723.
9
Direct chemical method for sequencing RNA.RNA测序的直接化学方法。
Proc Natl Acad Sci U S A. 1979 Apr;76(4):1760-4. doi: 10.1073/pnas.76.4.1760.