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樗蚕5S RNA序列:昆虫5S RNA进化速率可变的证据。

5S RNA sequence from the Philosamia silkworm: evidence for variable evolutionary rates in insect 5S RNA.

作者信息

Xian-Rong G, Nicoghosian K, Cedergren R J

出版信息

Nucleic Acids Res. 1982 Sep 25;10(18):5711-6. doi: 10.1093/nar/10.18.5711.

DOI:10.1093/nar/10.18.5711
PMID:7145713
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC320918/
Abstract

The primary structure of 5S RNA isolated from the posterior silkgland of Philosamia cynthia ricini was determined using three in vitro labelling techniques. The derived sequence consists of 119 nucleotides and can be folded into the secondary structure model proposed for eukaryotic 5S RNAs. This 5S RNA differs from the Bombyx mori molecule in 9 positions and from the Drosophila melanogaster sequence in 14 positions. The comparison of evolutionary rates in insect 5S RNA with inferred rates in other eukaryotic phyla leads to the conclusion that 5S RNA evolution is not constant in different eukaryotic branches, a condition which must be taken into account in phylogenetic tree constructions.

摘要

利用三种体外标记技术确定了从蓖麻蚕后丝腺分离出的5S RNA的一级结构。推导的序列由119个核苷酸组成,可折叠成提出的真核生物5S RNA的二级结构模型。这种5S RNA与家蚕分子在9个位置不同,与黑腹果蝇序列在14个位置不同。将昆虫5S RNA的进化速率与其他真核生物门的推断速率进行比较,得出结论:5S RNA在不同真核生物分支中的进化并非恒定,这一情况在系统发育树构建中必须加以考虑。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f38/320918/eeb444dd4692/nar00387-0318-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f38/320918/eeb444dd4692/nar00387-0318-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f38/320918/eeb444dd4692/nar00387-0318-a.jpg

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本文引用的文献

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Nucleotide sequences of Acanthamoeba castellanii 5S and 5.8S ribosomal ribonucleic acids: phylogenetic and comparative structural analyses.卡氏棘阿米巴5S和5.8S核糖体核糖核酸的核苷酸序列:系统发育和比较结构分析
Nucleic Acids Res. 1981 Jul 24;9(14):3321-34. doi: 10.1093/nar/9.14.3321.
2
The evolving tRNA molecule.不断进化的转运RNA分子。
CRC Crit Rev Biochem. 1981;11(1):35-104. doi: 10.3109/10409238109108699.
3
A strategy for sequence phylogeny research.一种序列系统发育研究策略。
日本海绵(Halichondria japonica)和海鞘(Halocynthia roretzi)5S核糖体RNA的核苷酸序列及其系统发育位置。
Nucleic Acids Res. 1983 Apr 11;11(7):1969-74. doi: 10.1093/nar/11.7.1969.
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Collection of published 5S and 5.8S ribosomal RNA sequences.已发表的5S和5.8S核糖体RNA序列的收集。
Nucleic Acids Res. 1984;12 Suppl(Suppl):r133-66. doi: 10.1093/nar/12.suppl.r133.
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Conserved 5' flank homologies in dipteran 5S RNA genes that would function on 'A' form DNA.双翅目5S RNA基因中保守的5'侧翼同源性,其可作用于“A”型DNA。
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Nucleic Acids Res. 1985;13 Suppl(Suppl):r105-53. doi: 10.1093/nar/13.suppl.r105.
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Nucleic Acids Res. 1981 Jan 10;9(1):47-53. doi: 10.1093/nar/9.1.47.
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FEBS Lett. 1976 Feb 15;62(2):146-9. doi: 10.1016/0014-5793(76)80039-7.
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