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利用统计物理学分析分子在膜中的空间分配行为。在凝胶色谱和电泳中的应用。

Analysis of steric partition behavior of molecules in membranes using statistical physics. Application to gel chromatography and electrophoresis.

作者信息

Schnitzer J E

机构信息

Department of Cell Biology, Yale University School of Medicine, New Haven, Connecticut 06510.

出版信息

Biophys J. 1988 Dec;54(6):1065-76. doi: 10.1016/S0006-3495(88)83043-1.

Abstract

The principles of statistical physics are used to formulate general expressions for the steric partition behavior of molecules in both random and ordered membrane structures that may be applied to any shape of the solute and/or the volume-excluding element of the membrane. These expressions fully define partitioning in terms of the volume excluded to point molecules and to finite-sized molecules. The mean effective exclusion volume for a molecule is calculated as a function of a global interaction energy, which varies with position, conformation, and orientation of the molecule. It allows consideration of electrostatic and other nonsteric factors. To test the model, specific partition functions are derived for several simple geometries describing the membrane and solute. Frequently, the derived expressions agree with past analyses; however, a new expression describing partitioning within an random network of fibers is derived. It agrees with past results only in the limit of low exclusion volumes. With greater volume exclusions, past results greatly overestimate the partition function. It is applied to gel electrophoresis and chromatography and survives testing with available experimental data. Unlike past analyses, it predicts nonlinear Ferguson plots for agarose gel electrophoresis. In addition, an analytical expression predicting the minimum radius of a sphere excluded from a random fiber matrix is derived, tested, and found to agree with experimental data.

摘要

统计物理学原理被用于推导分子在随机和有序膜结构中的空间分配行为的一般表达式,这些表达式可应用于任何形状的溶质和/或膜的体积排除元素。这些表达式根据点分子和有限尺寸分子的排除体积完全定义了分配情况。分子的平均有效排除体积是作为全局相互作用能的函数来计算的,该全局相互作用能随分子的位置、构象和取向而变化。它允许考虑静电和其他非空间因素。为了测试该模型,针对描述膜和溶质的几种简单几何形状推导了特定的分配函数。通常,推导出来的表达式与过去的分析结果一致;然而,推导得出了一个描述纤维随机网络内部分配的新表达式。它仅在低排除体积的极限情况下与过去的结果一致。随着排除体积的增加,过去的结果大大高估了分配函数。它被应用于凝胶电泳和色谱法,并通过现有实验数据的检验。与过去的分析不同,它预测琼脂糖凝胶电泳的弗格森图呈非线性。此外,推导、测试并发现一个预测从随机纤维基质中排除的球体最小半径的解析表达式与实验数据一致。

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