Eom Seok Hyun, Na Jong-Kuk
Department of Horticultural Biotechnology, Kyung Hee University, Yongin, 17104, Republic of Korea.
Department of Controlled Agriculture, Kangwon National University, Chuncheon, Kangwon, 24341, Republic of Korea.
Data Brief. 2019 Aug 2;25:104297. doi: 10.1016/j.dib.2019.104297. eCollection 2019 Aug.
The data presented in this article are associated to the research articles, "DOI: 10.1007/s11295-019-1348-3", [1]; and "DOI: 10.1007/s13205-018-1162-x" [2]. Burm. f. and Cav. are medicinal tree plants [3,4] native to Southeast Asia and China, and most members of both the genus and the genus contain various valuable secondary metabolites with a great potential for drug development. Though many phytochemical studies have been conducted using plant extracts from various parts of these plants [4,5], there are very limited genetic resources available. RNA sequencing of and was conducted using pair-end Illumina HiSeq2500 sequencing system, from which the first transcriptome data were produced for both genus and . Transcriptome shotgun assembly using three different assembly tools [2] generated a total of 16,638 non-redundant contigs (N50, 900 bp) from and 7,857 (N50, 423 bp) from . The data are accessible at NCBI BioProject: PRJNA428402 for [2] or PRJNA435648 for [1].
本文所呈现的数据与研究论文相关，论文“DOI: 10.1007/s11295-019-1348-3”[1]以及“DOI: 10.1007/s13205-018-1162-x”[2]。Burm. f.和Cav.是原产于东南亚和中国的药用树木植物[3,4]，并且这两个属的大多数成员都含有各种有价值的次生代谢产物，具有很大的药物开发潜力。尽管已经使用这些植物各个部位的植物提取物进行了许多植物化学研究[4,5]，但可用的遗传资源非常有限。使用双末端Illumina HiSeq2500测序系统对Burm. f.和Cav.进行了RNA测序，由此首次产生了这两个属的转录组数据。使用三种不同的组装工具[2]进行转录组鸟枪法组装，从Burm. f.中总共产生了16,638个非冗余重叠群（N50，900 bp），从Cav.中产生了7,857个（N50，423 bp）。这些数据可在NCBI生物项目中获取：Burm. f.的为PRJNA428402 [2]，Cav.的为PRJNA435648 [1]。
