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ABCD:阿尔茨海默病生物标志物综合数据库。

ABCD: Alzheimer's disease Biomarkers Comprehensive Database.

作者信息

Kumar Ashwani, Bansal Ankush, Singh Tiratha Raj

机构信息

Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh 173234 India.

出版信息

3 Biotech. 2019 Oct;9(10):351. doi: 10.1007/s13205-019-1888-0. Epub 2019 Sep 3.

Abstract

Alzheimer's disease (AD) is an age-related, non-reversible, and progressive brain disorder. Memory loss, confusion, and personality changes are major symptoms noticed. AD ultimately leads to a severe loss of mental function. Due to lack of effective biomarkers, no effective medication was available for the complete treatment of AD. There is a need to provide all AD-related essential information to the scientific community. Our resource Alzheimer's disease Biomarkers Comprehensive Database (ABCD) is being planned to accomplish this objective. ABCD is a huge collection of AD-related data of molecular markers. The web interface contains information concerning the proteins, genes, transcription factors, SNPs, miRNAs, mitochondrial genes, and expressed genes implicated in AD pathogenesis. In addition to the molecular-level data, the database has information for animal models, medicinal candidates and pathways involved in the AD and some image data for AD patients. ABCD is coupled with some major external resources where the user can retrieve additional general information about the disease. The database was designed in such a manner that user can extract meaningful information about gene, protein, pathway, and regulatory elements based search options. This database is unique in the sense that it is completely dedicated to specific neurological disorder i.e. AD. Further advance options like AD-affected brain image data of patients and structural compound level information add values to our database. Features of this database enable users to extract, analyze and display information related to a disease in many different ways. The database is available for academic purpose and accessible at http://www.bioinfoindia.org/abcd.

摘要

阿尔茨海默病(AD)是一种与年龄相关、不可逆且进行性发展的脑部疾病。记忆力减退、意识模糊和性格改变是主要的明显症状。AD最终会导致严重的精神功能丧失。由于缺乏有效的生物标志物,目前尚无有效的药物可用于AD的彻底治疗。有必要向科学界提供所有与AD相关的重要信息。我们的资源——阿尔茨海默病生物标志物综合数据库(ABCD)正在规划建设以实现这一目标。ABCD是一个包含与AD相关分子标志物数据的庞大集合。其网络界面包含了与AD发病机制相关的蛋白质、基因、转录因子、单核苷酸多态性(SNP)、微小RNA(miRNA)、线粒体基因以及表达基因的信息。除了分子水平的数据外,该数据库还拥有动物模型、AD相关的候选药物和通路的信息以及一些AD患者的图像数据。ABCD与一些主要的外部资源相连接,用户可以从中检索关于该疾病的更多一般信息。该数据库的设计方式使得用户能够基于搜索选项提取有关基因、蛋白质、通路和调控元件的有意义信息。这个数据库的独特之处在于它完全专注于特定的神经疾病,即AD。患者受AD影响的脑部图像数据和结构化合物水平信息等进一步的高级选项为我们的数据库增添了价值。该数据库的功能使用户能够以多种不同方式提取、分析和展示与疾病相关的信息。该数据库仅供学术使用,可通过http://www.bioinfoindia.org/abcd访问。

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