Laboratory of Microbiology, Service of Clinical Pathology, Centro Hospitalar Universitário de S. João, Alameda Prof. Hernâni Monteiro, 4200-319, Porto, Portugal.
Laboratory of Microbiology, Biological Sciences Department, Faculty of Pharmacy, University of Porto, Porto, Portugal.
Mycopathologia. 2019 Oct;184(5):645-651. doi: 10.1007/s11046-019-00377-0. Epub 2019 Sep 10.
Infections caused by filamentous fungi are rising in incidence and became a serious health concern. Their rapid and reliable identification in the clinical laboratory is essential for an early and accurate diagnosis to guide timely therapy. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been reported as a rapid and reliable method for identification of bacteria and yeasts isolated from clinical samples. However, it has less used for molds identification. The aim of this study was to evaluate Vitek MS (a MALDI-TOF MS system) ability to identify molds and differentiate species within a complex. A collection of 90 filamentous fungi, 70 clinical and 20 environmental isolates, was studied by morphological and molecular methods and by Vitek MS. Seventy-four isolates (82.2%) were identified using Vitek MS v3.0 at Genus/Complex/Species group level; within these, 47/74 (63.5%) were correctly identified at species level and only one was misidentified. In contrast, 16/90 isolates (17.8%) were not identified, of which 13 were not present in the database. Results here expressed favor Vitek MS v3.0 as a very useful system for identification of most common clinical isolates of filamentous fungi. Accordingly, it may be an important tool for clinical microbiology laboratories in their task to answer to clinicians, adequately and rapidly, helping in proper patient's management.
丝状真菌引起的感染发病率上升,成为一个严重的健康问题。在临床实验室中快速、可靠地鉴定这些真菌对于早期、准确的诊断以指导及时的治疗至关重要。基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)已被报道为一种快速、可靠的方法,可用于鉴定从临床样本中分离出的细菌和酵母菌。然而,它在鉴定霉菌方面的应用较少。本研究旨在评估 Vitek MS(一种 MALDI-TOF MS 系统)识别霉菌和区分复杂物种的能力。通过形态学和分子方法以及 Vitek MS 对 90 株丝状真菌、70 株临床分离株和 20 株环境分离株进行了研究。使用 Vitek MS v3.0 在属/复合物/种群水平上鉴定了 74 株(82.2%)分离株;其中,47/74 株(63.5%)在种水平上得到正确鉴定,只有 1 株被错误鉴定。相比之下,90 株分离株中有 16 株(17.8%)未被鉴定,其中 13 株不在数据库中。这里的结果表明,Vitek MS v3.0 是一种非常有用的系统,可用于鉴定大多数常见的临床丝状真菌分离株。因此,它可能是临床微生物学实验室回答临床医生的重要工具,能够快速、准确地帮助患者得到适当的治疗。