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鞑靼斯坦共和国西北地区菌株与肾综合征出血热患者临床表现的相关性特征分析

Characterization of the Strains in the Northwestern Region of the Republic of Tatarstan in Relation to the Clinical Manifestations in Hemorrhagic Fever With Renal Syndrome Patients.

作者信息

Davidyuk Yuriy N, Kabwe Emmanuel, Shakirova Venera G, Martynova Ekaterina V, Ismagilova Ruzilya K, Khaertynova Ilsiyar M, Khaiboullina Svetlana F, Rizvanov Albert A, Morzunov Sergey P

机构信息

OpenLab Gene and Cell Technologies, Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Russia.

Department of Infectious Diseases, Kazan State Medical Academy, Kazan, Russia.

出版信息

Front Pharmacol. 2019 Sep 5;10:970. doi: 10.3389/fphar.2019.00970. eCollection 2019.

Abstract

Over 1,000 cases of hemorrhagic fever with renal syndrome (HFRS) were recorded in the Republic of Tatarstan (RT) in 2015. HFRS is a zoonotic disease caused by several different Old World hantaviruses. In RT, (PUUV) is a prevalent etiological agent of HFRS. We looked for the genetic link between the PUUV strains isolated from the bank voles and from the infected humans. In addition, possible correlation between the genetic makeup of the PUUV strain involved and different clinical picture of HFRS was investigated. Partial PUUV small (S) genome segment sequences were retrieved from 37 small animals captured in the northwestern region of RT in 2015. Phylogenetic analysis revealed that 34 PUUV sequences clustered with strains of the previously identified "Russia" (RUS) genetic lineage, while 3 remaining PUUV sequences clustered with the known lineage from Finland (FIN). Sequence comparisons showed that the majority of the S-segment sequences isolated in the current study displayed 98.2-100.0% sequence identity when compared with the strains isolated earlier from the HFRS patients hospitalized in Kazan city. HFRS patients infected with PUUV strains of either RUS or FIN genetic lineages were observed to have consistent differences in clinical presentation of the disease and laboratory findings. These findings indicated a strong genetic link between the infected bank voles and human HFRS cases from the same localities. Thus, S-segment sequences of the PUUV strains isolated from HFRS patients could serve as a molecular marker for determining the likely geographic area where infection occurred.

摘要

2015年,鞑靼斯坦共和国(RT)记录了1000多例肾综合征出血热(HFRS)病例。HFRS是一种由几种不同的旧大陆汉坦病毒引起的人畜共患病。在RT,普马拉病毒(PUUV)是HFRS的主要病原体。我们寻找从棕背鼠平分离出的PUUV毒株与从感染人类分离出的毒株之间的基因联系。此外,还研究了所涉及的PUUV毒株的基因组成与HFRS不同临床表现之间可能的相关性。从2015年在RT西北地区捕获的37只小动物中获取了部分PUUV小(S)基因组片段序列。系统发育分析表明,34个PUUV序列与先前鉴定的“俄罗斯”(RUS)遗传谱系的毒株聚类,而其余3个PUUV序列与来自芬兰(FIN)的已知谱系聚类。序列比较表明,与早些时候从喀山市住院的HFRS患者分离出的毒株相比,本研究中分离出的大多数S片段序列显示出98.2 - 100.0%的序列同一性。观察到感染RUS或FIN遗传谱系的PUUV毒株的HFRS患者在疾病临床表现和实验室检查结果方面存在一致差异。这些发现表明受感染的棕背鼠平与来自同一地区的人类HFRS病例之间存在紧密的基因联系。因此,从HFRS患者分离出的PUUV毒株的S片段序列可作为确定感染可能发生地理区域的分子标记。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e522/6739438/ff4593572302/fphar-10-00970-g001.jpg

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