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艾比湖湿地古菌多样性及其与环境因子的相关性。

Diversity of Archaea and Its Correlation with Environmental Factors in the Ebinur Lake Wetland.

机构信息

Comprehensive Microbe Resources Lab B, College of Life Science, Shihezi University, Shihezi, 832000, Xinjiang, China.

出版信息

Curr Microbiol. 2019 Dec;76(12):1417-1424. doi: 10.1007/s00284-019-01768-8. Epub 2019 Sep 24.

Abstract

The diversity and community composition of archaea in soil samples from three wetlands (SP1, SP2, and SP3) of Ebinur Lake were studied by constructing 16S rDNA cloning library. The correlation between the diversity of archaea and soil environmental factors was analyzed by CANOCO software. The aim of this study was to reveal the differences of community structures of archaea in different sample sites, to provide a theoretical basis for further study on degradation and restoration of Ebinur Lake wetland. The results showed that Euryarchaeota accounted for 57.1% was the most dominant phylum observed, followed by Thaumarchaeota and Crenarchaeota for the three wetland soil analyzed. Compared with SP3 site, the proportions of Euryarchaeota were decreased by 16.70% and 31.78%, while Thaumarchaeota increased by 7.26% and 17.64% in the SP1 and SP2, respectively. Crenarchaeota was found only in SP3. Shannon-wiener diversity indices in SP1, SP2, and SP3 sites were 3.44, 3.87, and 3.94, respectively, indicating that the diversity of archaea in three plots was: SP3 > SP2 > SP1. Redundancy analysis (RDA) showed that electrical conductivity (EC), soil moisture (SM), hydrogen potential (pH), and soil organic matter content (SOM) may affect archaeal communities. Compared to EC and pH, SM and SOM may have a greater impact on the community composition of archaea.

摘要

采用构建 16S rDNA 克隆文库的方法,研究了艾比湖三个湿地(SP1、SP2 和 SP3)土壤样品中古菌的多样性和群落组成。利用 CANOCO 软件分析了古菌多样性与土壤环境因子的相关性。本研究旨在揭示不同采样点古菌群落结构的差异,为进一步研究艾比湖湿地的降解与恢复提供理论依据。结果表明,在分析的三个湿地土壤中,广古菌门(Euryarchaeota)占比 57.1%,为最优势的门类,其次为泉古菌门( Thaumarchaeota )和始古菌门( Crenarchaeota )。与 SP3 点相比,SP1 和 SP2 点的广古菌门比例分别下降了 16.70%和 31.78%,而泉古菌门的比例分别增加了 7.26%和 17.64%。始古菌门仅在 SP3 点发现。SP1、SP2 和 SP3 点的 Shannon-wiener 多样性指数分别为 3.44、3.87 和 3.94,表明三个样点古菌的多样性为:SP3>SP2>SP1。冗余分析(RDA)表明,电导率(EC)、土壤水分(SM)、氢势(pH)和土壤有机质含量(SOM)可能影响古菌群落。与 EC 和 pH 相比,SM 和 SOM 可能对古菌群落组成有更大的影响。

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