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北极融水湖区古菌多样性研究。

Study of Archaeal Diversity in the Arctic Meltwater Lake Region.

作者信息

Qin Yiling, Wang Nengfei, Zheng Li, Li Qinxin, Wang Long, Xu Xiaoyu, Yin Xiaofei

机构信息

First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China.

School of Chemistry and Chemical Engineering, Linyi University, Linyi 276000, China.

出版信息

Biology (Basel). 2023 Jul 20;12(7):1023. doi: 10.3390/biology12071023.

Abstract

Two typical lakes formed from meltwater in the Ny-Ålesund area were taken as the study subjects in 2018. To investigate the archaeal community compositions of the two lakes, 16S rRNA genes from soil samples from the intertidal and subtidal zones of the two lakes were sequenced with high throughput. At the phylum level, the intertidal zone was dominated by Crenarchaeota and the subtidal zone was dominated by Halobacter; at the genus level, the intertidal zone was dominated by and Candidatus_, while the subtidal zone was dominated by . The soil physicochemical factors pH, moisture content (MC), total organic carbon (TOC), total organic nitrogen (TON), nitrite nitrogen (NO-N), and nitrate nitrogen (NO-N) were significantly different in the intertidal and subtidal zones of the lake. By redundancy analysis, the results indicated that NH-N, SiO-Si, MC, NO-N, and NO-N have had highly significant effects on the archaeal diversity and distribution. A weighted gene co-expression network analysis (WGCNA) was used to search for hub archaea associated with physicochemical factors. The results suggested that these physicochemical factors play important roles in the diversity and structure of the archaeal community at different sites by altering the abundance of certain hub archaea. In addition, was found to be the hub archaea genus at every site.

摘要

2018年,选取了位于新奥尔松地区由融水形成的两个典型湖泊作为研究对象。为了调查这两个湖泊的古菌群落组成,对这两个湖泊潮间带和潮下带土壤样本中的16S rRNA基因进行了高通量测序。在门水平上,潮间带以泉古菌门为主,潮下带以盐杆菌为主;在属水平上,潮间带以 和 为主,而潮下带以 为主。湖泊潮间带和潮下带的土壤理化因子pH值、含水量(MC)、总有机碳(TOC)、总有机氮(TON)、亚硝酸盐氮(NO₂-N)和硝酸盐氮(NO₃-N)存在显著差异。通过冗余分析,结果表明NH₄-N、SiO₂-Si、MC、NO₂-N和NO₃-N对古菌多样性和分布有极显著影响。利用加权基因共表达网络分析(WGCNA)来寻找与理化因子相关的关键古菌。结果表明,这些理化因子通过改变某些关键古菌的丰度,在不同位点的古菌群落多样性和结构中发挥重要作用。此外,发现 是每个位点的关键古菌属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b104/10376139/6c84ac70f49d/biology-12-01023-g001.jpg

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