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基于压缩感知光谱域光学相干断层成像的生物组织结构与功能传感

Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography.

机构信息

State Key Laboratory of Precision Measurement Technology & Instruments, Department of Precision Instrument, Tsinghua University, Beijing 100084, China.

出版信息

Sensors (Basel). 2019 Sep 27;19(19):4208. doi: 10.3390/s19194208.

DOI:10.3390/s19194208
PMID:31569799
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6807266/
Abstract

In this paper, a full depth 2D CS-SDOCT approach is proposed, which combines two-dimensional (2D) compressive sensing spectral-domain optical coherence tomography (CS-SDOCT) and dispersion encoding (ED) technologies, and its applications in structural imaging and functional sensing of bio-tissues are studied. Specifically, by introducing a large dispersion mismatch between the reference arm and sample arm in SD-OCT system, the reconstruction of the under-sampled A-scan data and the removal of the conjugated images can be achieved simultaneously by only two iterations. The under-sampled B-scan data is then reconstructed using the classic CS reconstruction algorithm. For a 5 mm × 3.2 mm fish-eye image, the conjugated image was reduced by 31.4 dB using 50% × 50% sampled data (250 depth scans and 480 spectral sampling points per depth scan), and all A-scan data was reconstructed in only 1.2 s. In addition, we analyze the application performance of the CS-SDOCT in functional sensing of locally homogeneous tissue. Simulation and experimental results show that this method can correctly reconstruct the extinction coefficient spectrum under reasonable iteration times. When 8 iterations were used to reconstruct the A-scan data in the imaging experiment of fisheye, the extinction coefficient spectrum calculated using 50% × 50% data was approximately consistent with that obtained with 100% data.

摘要

本文提出了一种全深度二维压缩光谱域光学相干断层扫描(CS-SDOCT)方法,它结合了二维(2D)压缩感知光谱域光学相干断层扫描(CS-SDOCT)和色散编码(ED)技术,并研究了其在生物组织结构成像和功能传感中的应用。具体来说,通过在 SD-OCT 系统中引入参考臂和样品臂之间的大色散失配,可以通过仅两次迭代同时实现对欠采样 A 扫描数据的重建和共轭像的去除。然后使用经典的 CS 重建算法重建欠采样的 B 扫描数据。对于 5mm×3.2mm 的鱼眼图像,使用 50%×50%的采样数据(250 个深度扫描和每个深度扫描 480 个光谱采样点)可以将共轭像减少 31.4dB,并且仅需 1.2s 即可重建所有 A 扫描数据。此外,我们分析了 CS-SDOCT 在局部均匀组织功能传感中的应用性能。模拟和实验结果表明,该方法在合理的迭代次数下可以正确重建消光系数谱。在鱼眼成像实验中,使用 8 次迭代重建 A 扫描数据时,使用 50%×50%数据计算得到的消光系数谱与使用 100%数据得到的消光系数谱基本一致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/756ef19d48f9/sensors-19-04208-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/bfb256b8b449/sensors-19-04208-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/80fbfaf802b5/sensors-19-04208-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/b9fe643a03ae/sensors-19-04208-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/9f83c2e9e02e/sensors-19-04208-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/1433fa404921/sensors-19-04208-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/e0c213652e9e/sensors-19-04208-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/756ef19d48f9/sensors-19-04208-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/bfb256b8b449/sensors-19-04208-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/80fbfaf802b5/sensors-19-04208-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/b9fe643a03ae/sensors-19-04208-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/9f83c2e9e02e/sensors-19-04208-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/1433fa404921/sensors-19-04208-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/e0c213652e9e/sensors-19-04208-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8c76/6807266/756ef19d48f9/sensors-19-04208-g007.jpg

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Full-depth spectral domain optical coherence tomography technology insensitive to phase disturbance.对相位干扰不敏感的全深度光谱域光学相干断层扫描技术。
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All-depth dispersion cancellation in spectral domain optical coherence tomography using numerical intensity correlations.
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Sci Rep. 2018 Jun 15;8(1):9170. doi: 10.1038/s41598-018-27388-z.
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Twenty-five years of optical coherence tomography: the paradigm shift in sensitivity and speed provided by Fourier domain OCT [Invited].光学相干断层扫描的二十五年:傅里叶域光学相干断层扫描带来的灵敏度和速度的范式转变[特邀报告]
Biomed Opt Express. 2017 Jun 15;8(7):3248-3280. doi: 10.1364/BOE.8.003248. eCollection 2017 Jul 1.
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