• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

哺乳动物基因组中DNA甲基化的基因特异性靶向

Gene-Specific Targeting of DNA Methylation in the Mammalian Genome.

作者信息

Urbano Arthur, Smith Jim, Weeks Robert J, Chatterjee Aniruddha

机构信息

Department of Pathology, Dunedin School of Medicine, University of Otago, 56 Hanover Street, Dunedin 9054, New Zealand.

Maurice Wilkins Centre for Molecular Biodiscovery, 3A Symonds Street, Private Bag 92019, Auckland, New Zealand.

出版信息

Cancers (Basel). 2019 Oct 9;11(10):1515. doi: 10.3390/cancers11101515.

DOI:10.3390/cancers11101515
PMID:31600992
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6827012/
Abstract

DNA methylation is the most widely-studied epigenetic modification, playing a critical role in the regulation of gene expression. Dysregulation of DNA methylation is implicated in the pathogenesis of numerous diseases. For example, aberrant DNA methylation in promoter regions of tumor-suppressor genes has been strongly associated with the development and progression of many different tumors. Accordingly, technologies designed to manipulate DNA methylation at specific genomic loci are very important, especially in the context of cancer therapy. Traditionally, epigenomic editing technologies have centered around zinc finger proteins (ZFP)- and transcription activator-like effector protein (TALE)-based targeting. More recently, however, the emergence of clustered regulatory interspaced short palindromic repeats (CRISPR)-deactivated Cas9 (dCas9)-based editing systems have shown to be a more specific and efficient method for the targeted manipulation of DNA methylation. Here, we describe the regulation of the DNA methylome, its significance in cancer and the current state of locus-specific editing technologies for altering DNA methylation.

摘要

DNA甲基化是研究最为广泛的表观遗传修饰,在基因表达调控中发挥着关键作用。DNA甲基化失调与多种疾病的发病机制有关。例如,肿瘤抑制基因启动子区域的异常DNA甲基化与许多不同肿瘤的发生和发展密切相关。因此,旨在在特定基因组位点操纵DNA甲基化的技术非常重要,尤其是在癌症治疗的背景下。传统上,表观基因组编辑技术主要围绕基于锌指蛋白(ZFP)和转录激活样效应蛋白(TALE)的靶向作用。然而,最近出现的基于成簇规律间隔短回文重复序列(CRISPR)-失活的Cas9(dCas9)编辑系统已被证明是一种更特异、高效的靶向操纵DNA甲基化的方法。在此,我们描述了DNA甲基化组的调控、其在癌症中的意义以及用于改变DNA甲基化的位点特异性编辑技术的现状。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/acdde07d97e1/cancers-11-01515-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/0bb226420150/cancers-11-01515-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/99ff0b1f6cec/cancers-11-01515-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/a3ea194ba4b2/cancers-11-01515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/acdde07d97e1/cancers-11-01515-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/0bb226420150/cancers-11-01515-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/99ff0b1f6cec/cancers-11-01515-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/a3ea194ba4b2/cancers-11-01515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce94/6827012/acdde07d97e1/cancers-11-01515-g004.jpg

相似文献

1
Gene-Specific Targeting of DNA Methylation in the Mammalian Genome.哺乳动物基因组中DNA甲基化的基因特异性靶向
Cancers (Basel). 2019 Oct 9;11(10):1515. doi: 10.3390/cancers11101515.
2
Epigenome editing for targeted DNA (de)methylation: a new perspective in modulating gene expression.表观基因组编辑靶向 DNA(去)甲基化:调节基因表达的新视角。
Crit Rev Biochem Mol Biol. 2024 Feb-Apr;59(1-2):69-98. doi: 10.1080/10409238.2024.2320659. Epub 2024 Mar 5.
3
Stabilization of Foxp3 expression by CRISPR-dCas9-based epigenome editing in mouse primary T cells.基于CRISPR-dCas9的表观基因组编辑在小鼠原代T细胞中对Foxp3表达的稳定作用。
Epigenetics Chromatin. 2017 May 8;10:24. doi: 10.1186/s13072-017-0129-1. eCollection 2017.
4
Gene targeting technologies in rats: zinc finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindromic repeats.大鼠中的基因靶向技术:锌指核酸酶、转录激活样效应因子核酸酶和成簇规律间隔短回文重复序列。
Dev Growth Differ. 2014 Jan;56(1):46-52. doi: 10.1111/dgd.12110. Epub 2013 Dec 27.
5
CRISPR-mediated promoter de/methylation technologies for gene regulation.CRISPR 介导的启动子去/甲基化技术用于基因调控。
Arch Pharm Res. 2020 Jul;43(7):705-713. doi: 10.1007/s12272-020-01257-8. Epub 2020 Jul 28.
6
Zinc Fingers, TALEs, and CRISPR Systems: A Comparison of Tools for Epigenome Editing.锌指蛋白、转录激活样效应因子及CRISPR系统:表观基因组编辑工具比较
Methods Mol Biol. 2018;1767:19-63. doi: 10.1007/978-1-4939-7774-1_2.
7
Editing of DNA Methylation Using dCas9-Peptide Repeat and scFv-TET1 Catalytic Domain Fusions.使用dCas9-肽重复序列和scFv-TET1催化结构域融合体对DNA甲基化进行编辑
Methods Mol Biol. 2018;1767:419-428. doi: 10.1007/978-1-4939-7774-1_23.
8
Gene Editing in Clinical Practice: Where are We?临床实践中的基因编辑:我们目前处于什么阶段?
Indian J Clin Biochem. 2019 Jan;34(1):19-25. doi: 10.1007/s12291-018-0804-4. Epub 2019 Jan 1.
9
Harnessing targeted DNA methylation and demethylation using dCas9.利用 dCas9 靶向 DNA 甲基化和去甲基化。
Essays Biochem. 2019 Dec 20;63(6):813-825. doi: 10.1042/EBC20190029.
10
Optimized Protocol for the Regulation of DNA Methylation and Gene Expression Using Modified dCas9-SunTag Platforms.优化使用修饰的 dCas9-SunTag 平台调控 DNA 甲基化和基因表达的方案。
Methods Mol Biol. 2024;2842:155-165. doi: 10.1007/978-1-0716-4051-7_7.

引用本文的文献

1
NKAPL suppresses NSCLC progression by enhancing the protein stability of TRIM21 and further inhibiting the NF-κB signaling pathway.NKAPL通过增强TRIM21的蛋白质稳定性并进一步抑制NF-κB信号通路来抑制非小细胞肺癌的进展。
Genes Dis. 2025 Mar 11;12(5):101598. doi: 10.1016/j.gendis.2025.101598. eCollection 2025 Sep.
2
The role of PAX1 and JAM3 methylation in predicting the pathological upgrading of cervical intraepithelial neoplasia before conization.PAX1和JAM3甲基化在预测宫颈上皮内瘤变锥切术前病理升级中的作用。
Sci Rep. 2025 May 21;15(1):17684. doi: 10.1038/s41598-025-01422-3.
3
CRISPR-Cas Systems: A Functional Perspective and Innovations.

本文引用的文献

1
Reprogrammable CRISPR/dCas9-based recruitment of DNMT1 for site-specific DNA demethylation and gene regulation.基于可重编程CRISPR/dCas9的DNMT1募集用于位点特异性DNA去甲基化和基因调控。
Cell Discov. 2019 Apr 16;5:22. doi: 10.1038/s41421-019-0090-1. eCollection 2019.
2
DNA methylation in human diseases.人类疾病中的DNA甲基化
Genes Dis. 2018 Jan 31;5(1):1-8. doi: 10.1016/j.gendis.2018.01.002. eCollection 2018 Mar.
3
Marked Global DNA Hypomethylation Is Associated with Constitutive PD-L1 Expression in Melanoma.显著的全基因组DNA低甲基化与黑色素瘤中组成性程序性死亡配体1(PD-L1)表达相关。
CRISPR-Cas系统:功能视角与创新
Int J Mol Sci. 2025 Apr 12;26(8):3645. doi: 10.3390/ijms26083645.
4
DNA methylation patterns and predictive models for metabolic disease risk in offspring of gestational diabetes mellitus.妊娠期糖尿病患者后代代谢疾病风险的DNA甲基化模式及预测模型
Diabetol Metab Syndr. 2025 May 2;17(1):147. doi: 10.1186/s13098-025-01707-7.
5
A qualitative prognostic biomarker for melanoma based on the relative methylation orderings of CpG loci.一种基于CpG位点相对甲基化排序的黑色素瘤定性预后生物标志物。
Epigenetics. 2025 Dec;20(1):2487316. doi: 10.1080/15592294.2025.2487316. Epub 2025 Apr 3.
6
Inflammation and DNA methylation in Alzheimer's disease: mechanisms of epigenetic remodelling by immune cell oxidants in the ageing brain.阿尔茨海默病中的炎症和 DNA 甲基化:衰老大脑中免疫细胞氧化剂介导的表观遗传重塑机制。
Redox Rep. 2024 Dec;29(1):2428152. doi: 10.1080/13510002.2024.2428152. Epub 2024 Nov 23.
7
Role of epigenetic in cancer biology, in hematologic malignancies and in anticancer therapy.表观遗传学在癌症生物学、血液系统恶性肿瘤及抗癌治疗中的作用。
Front Mol Med. 2024 Sep 6;4:1426454. doi: 10.3389/fmmed.2024.1426454. eCollection 2024.
8
Functional Characterization of Accessible Chromatin in Common Wheat.普通小麦可及染色质的功能特征分析。
Int J Mol Sci. 2024 Aug 29;25(17):9384. doi: 10.3390/ijms25179384.
9
Epigenetics of hypertension as a risk factor for the development of coronary artery disease in type 2 diabetes mellitus.高血压的表观遗传学作为 2 型糖尿病患者发生冠心病的危险因素。
Front Endocrinol (Lausanne). 2024 May 21;15:1365738. doi: 10.3389/fendo.2024.1365738. eCollection 2024.
10
Targeted DNA Methylation Editing Using an All-in-One System Establishes Paradoxical Activation of .使用一体化系统进行靶向DNA甲基化编辑可导致……的反常激活 。 (原文此处不完整)
Cancers (Basel). 2024 Feb 23;16(5):898. doi: 10.3390/cancers16050898.
iScience. 2018 Jun 29;4:312-325. doi: 10.1016/j.isci.2018.05.021. Epub 2018 Jun 28.
4
A modular dCas9-SunTag DNMT3A epigenome editing system overcomes pervasive off-target activity of direct fusion dCas9-DNMT3A constructs.模块化 dCas9-SunTag DNMT3A 表观基因组编辑系统克服了直接融合 dCas9-DNMT3A 构建体普遍存在的脱靶活性。
Genome Res. 2018 Aug;28(8):1193-1206. doi: 10.1101/gr.233049.117. Epub 2018 Jun 15.
5
The CRISPR tool kit for genome editing and beyond.CRISPR 工具包用于基因组编辑及其他领域。
Nat Commun. 2018 May 15;9(1):1911. doi: 10.1038/s41467-018-04252-2.
6
Stable Expression of Epigenome Editors via Viral Delivery and Genomic Integration.通过病毒递送和基因组整合实现表观基因组编辑器的稳定表达。
Methods Mol Biol. 2018;1767:215-225. doi: 10.1007/978-1-4939-7774-1_11.
7
Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene.通过 FMR1 基因的 DNA 甲基化编辑拯救脆性 X 综合征神经元。
Cell. 2018 Feb 22;172(5):979-992.e6. doi: 10.1016/j.cell.2018.01.012. Epub 2018 Feb 15.
8
Hit-and-run epigenetic editing prevents senescence entry in primary breast cells from healthy donors.逃避打击的表观遗传编辑可防止来自健康供体的原代乳腺细胞进入衰老。
Nat Commun. 2017 Nov 13;8(1):1450. doi: 10.1038/s41467-017-01078-2.
9
DNA hypermethylation enhanced telomerase reverse transcriptase expression in human-induced pluripotent stem cells.DNA 超甲基化增强人诱导多能干细胞中端粒酶逆转录酶的表达。
Hum Cell. 2018 Jan;31(1):78-86. doi: 10.1007/s13577-017-0190-x. Epub 2017 Nov 4.
10
CRISPR/Cas9-Based Engineering of the Epigenome.基于 CRISPR/Cas9 的表观基因组工程。
Cell Stem Cell. 2017 Oct 5;21(4):431-447. doi: 10.1016/j.stem.2017.09.006.