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具有ANN2型雄性不育细胞质的向日葵线粒体基因组的组织特征

Organization Features of the Mitochondrial Genome of Sunflower ( L.) with ANN2-Type Male-Sterile Cytoplasm.

作者信息

Makarenko Maksim S, Usatov Alexander V, Tatarinova Tatiana V, Azarin Kirill V, Logacheva Maria D, Gavrilova Vera A, Kornienko Igor V, Horn Renate

机构信息

Department of Genetics, Southern Federal University, Rostov-on-Don 344006, Russia.

The Institute for Information Transmission Problems, Moscow 127051, Russia.

出版信息

Plants (Basel). 2019 Oct 23;8(11):439. doi: 10.3390/plants8110439.

Abstract

This study provides insights into the flexibility of the mitochondrial genome in sunflower ( L.) as well as into the causes of ANN2-type cytoplasmic male sterility (CMS). assembly of the mitochondrial genome of male-sterile HA89(ANN2) sunflower line was performed using high-throughput sequencing technologies. Analysis of CMS ANN2 mitochondrial DNA sequence revealed the following reorganization events: twelve rearrangements, seven insertions, and nine deletions. Comparisons of coding sequences from the male-sterile line with the male-fertile line identified a deletion of and seven new transcriptionally active open reading frames (ORFs): , , , , , , . Three of these ORFs represent chimeric genes involving (), (), and (). In addition, , , , as well as , encode proteins containing membrane domain(s), making them the most likely candidate genes for CMS development in ANN2. Although the investigated CMS phenotype may be caused by simultaneous action of several candidate genes, we assume that plays a major role in developing male sterility in ANN2. Comparative analysis of mitogenome organization in sunflower lines representing different CMS sources also allowed identification of reorganization hot spots in the mitochondrial genome of sunflower.

摘要

本研究深入探讨了向日葵(L.)线粒体基因组的灵活性以及ANN2型细胞质雄性不育(CMS)的成因。利用高通量测序技术对雄性不育的HA89(ANN2)向日葵品系的线粒体基因组进行了组装。对CMS ANN2线粒体DNA序列的分析揭示了以下重组事件:12次重排、7次插入和9次缺失。将雄性不育系与雄性可育系的编码序列进行比较,发现了一个 的缺失以及7个新的转录活性开放阅读框(ORF): 、 、 、 、 、 、 。其中3个ORF代表涉及 ()、 ()和 ()的嵌合基因。此外, 、 、 以及 编码含有膜结构域的蛋白质,使其成为ANN2中CMS发育最可能的候选基因。尽管所研究的CMS表型可能是由几个候选基因的共同作用引起的,但我们认为 在ANN2雄性不育的发生中起主要作用。对代表不同CMS来源的向日葵品系中线粒体基因组组织的比较分析,也有助于确定向日葵线粒体基因组中的重组热点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87b1/6918226/fbc31a1d6ede/plants-08-00439-g001.jpg

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