Department of Molecular and Cellular Biology , University of Colorado , Boulder , Colorado 80309 , United States.
J Proteome Res. 2020 Jan 3;19(1):360-370. doi: 10.1021/acs.jproteome.9b00575. Epub 2019 Dec 2.
The RNA-binding proteins TDP-43 and FUS are tied as the third leading known genetic cause for amyotrophic lateral sclerosis (ALS), and TDP-43 proteopathies are found in nearly all ALS patients. Both the natural function and contribution to pathology for TDP-43 remain unclear. The intersection of functions between TDP-43 and FUS can focus attention for those natural functions mostly likely to be relevant to disease. Here, we compare the role played by TDP-43 and FUS, maintaining chromatin stability for dividing HEK293T cells. We also determine and compare the interactomes of TDP-43 and FUS, quantitating changes in those before and after DNA damage. Finally, selected interactions with known importance to DNA damage repair were validated by co-immunoprecipitation assays. This study uncovered TDP-43 and FUS binding to several factors important to DNA repair mechanisms that can be replication-dependent, -independent, or both. These results provide further evidence that TDP-43 has an important role in DNA stability and provide new ways that TDP-43 can bind to the machinery that guards DNA integrity in cells.
TDP-43 和 FUS 这两种 RNA 结合蛋白并列成为导致肌萎缩性侧索硬化症(ALS)的第三个已知主要遗传原因,TDP-43 蛋白病存在于几乎所有 ALS 患者中。TDP-43 的自然功能及其对病理学的贡献仍不清楚。TDP-43 和 FUS 之间功能的交叉可能会关注那些与疾病最相关的自然功能。在这里,我们比较了 TDP-43 和 FUS 在维持分裂的 HEK293T 细胞染色质稳定性方面所起的作用。我们还确定并比较了 TDP-43 和 FUS 的相互作用组,定量分析了 DNA 损伤前后的变化。最后,通过共免疫沉淀测定验证了与 DNA 损伤修复已知重要性的选定相互作用。这项研究揭示了 TDP-43 和 FUS 与几种对 DNA 修复机制很重要的因子结合,这些因子可以是复制依赖性的、复制独立性的,或两者兼有。这些结果进一步证明了 TDP-43 在 DNA 稳定性中具有重要作用,并为 TDP-43 可以与细胞中保护 DNA 完整性的机制结合提供了新的途径。