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胚胎的微创染色体筛查和胚胎培养介质中 DNA 的遗传研究进行胚胎评估。

Less-invasive chromosome screening of embryos and embryo assessment by genetic studies of DNA in embryo culture medium.

机构信息

Reproductive Medical Center, Department of Obstetrics and Gynecology, General Hospital of Tianjin Medical University, Tianjin, 300052, China.

出版信息

J Assist Reprod Genet. 2019 Dec;36(12):2505-2513. doi: 10.1007/s10815-019-01603-w. Epub 2019 Nov 15.

DOI:10.1007/s10815-019-01603-w
PMID:31728811
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6911138/
Abstract

PURPOSE

To perform a preliminary exploration of a new embryo rank in clinical practice by combining the embryo chromosome copy number and mitochondrial copy number analysis of DNA extracted from embryo culture medium and blastocoel fluid.

METHOD

Eighty-three ICSI embryos from day 2 or day 3 were cultured to day 5 or day 6. Thirty-two blastocysts of 3 cc or above were obtained. Culture medium and blastocoel fluid were collected at 24 h before blastocyst formation. The genomic DNA and mitochondrial DNA (mtDNA) from the culture medium combined with blastocoel fluid and the whole blastocyst were amplified and sequenced by MALBAC-NGS. We compared the chromosomal information generated by the new protocol from the culture medium and the information employed by the whole embryo method. A multivariable linear regression was performed to study the impact of the blastocyst morphological score, chromosomal abnormality, embryo mtDNA copy number, and female age on the culture medium mtDNA copy number.

RESULTS

(1) The DNA from 31 blastocysts was successfully amplified, and the successful amplification rate was 96.9% (31/32). The success rate of the amplification of genomic DNA extracted from the culture medium was 87.5% (28/32). (2) There were 18 blastocysts in which the less invasive method and the whole embryo method revealed the same results. The consistency rate was 66.7% (18/27). (3) The culture medium mitochondrial DNA copy number (MCN) had a significantly positive correlation with the blastocyst mitochondrial DNA copy number (P = 0.001), female age (P = 0.012), and blastocyst score (P = 0.014), but there was no obvious correlation with blastocyst chromosome (P = 0.138).

CONCLUSIONS

The preliminary exploration result of the less invasive approach for having an embryo rank was not satisfying, which still awaits further long-term evaluation.

摘要

目的

通过联合分析胚胎培养液和囊胚腔液中提取的 DNA 的胚胎染色体拷贝数和线粒体拷贝数,在临床实践中对胚胎等级进行初步探索。

方法

对第 2 天或第 3 天的 83 个 ICSI 胚胎进行培养,直至第 5 天或第 6 天。获得 3 cc 或以上的 32 个囊胚。在囊胚形成前 24 小时收集培养液和囊胚腔液。通过 MALBAC-NGS 对来自培养液和整个囊胚的培养基质 DNA 和线粒体 DNA(mtDNA)进行扩增和测序。我们比较了新方案从培养液中生成的染色体信息和整个胚胎方法所使用的信息。采用多元线性回归分析来研究囊胚形态评分、染色体异常、胚胎 mtDNA 拷贝数和女性年龄对培养液 mtDNA 拷贝数的影响。

结果

(1)31 个囊胚的 DNA 成功扩增,扩增成功率为 96.9%(31/32)。培养基质中提取的基因组 DNA 扩增成功率为 87.5%(28/32)。(2)有 18 个囊胚采用非侵入性方法和整个胚胎方法的结果相同,符合率为 66.7%(18/27)。(3)培养液线粒体 DNA 拷贝数(MCN)与囊胚线粒体 DNA 拷贝数(P=0.001)、女性年龄(P=0.012)和囊胚评分(P=0.014)呈显著正相关,但与囊胚染色体无明显相关性(P=0.138)。

结论

这种非侵入性方法对胚胎等级进行初步探索的结果并不令人满意,仍需要进一步的长期评估。

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本文引用的文献

1
Current status of spent embryo media research for preimplantation genetic testing.胚胎耗损培养液用于植入前遗传学检测的研究现状。
J Assist Reprod Genet. 2019 May;36(5):819-826. doi: 10.1007/s10815-019-01437-6. Epub 2019 Mar 21.
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Pushing the limits of detection: investigation of cell-free DNA for aneuploidy screening in embryos.突破检测极限:探讨游离 DNA 在胚胎非整倍体筛查中的应用。
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Evaluation of a novel non-invasive preimplantation genetic screening approach.新型非侵入性胚胎植入前遗传学筛查方法的评估。
PLoS One. 2018 May 10;13(5):e0197262. doi: 10.1371/journal.pone.0197262. eCollection 2018.
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Origin and composition of cell-free DNA in spent medium from human embryo culture during preimplantation development.在人类胚胎培养的植入前发育过程中,无细胞 DNA 来源于培养上清液中的细胞成分和滋养外胚层的凋亡。
Hum Reprod. 2018 Apr 1;33(4):745-756. doi: 10.1093/humrep/dey028.
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Comprehensive chromosomal and mitochondrial copy number profiling in human IVF embryos.人类体外受精胚胎的染色体和线粒体拷贝数综合分析。
Reprod Biomed Online. 2018 Jan;36(1):67-74. doi: 10.1016/j.rbmo.2017.10.110. Epub 2017 Nov 8.
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Detailed investigation into the cytogenetic constitution and pregnancy outcome of replacing mosaic blastocysts detected with the use of high-resolution next-generation sequencing.详细调查使用高分辨率下一代测序技术检测到的镶嵌胚泡的细胞遗传学构成和妊娠结局。
Fertil Steril. 2017 Jul;108(1):62-71.e8. doi: 10.1016/j.fertnstert.2017.05.002. Epub 2017 Jun 1.
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Assessing the true incidence of mosaicism in preimplantation embryos.评估胚胎种植前嵌合体的真实发生率。
Fertil Steril. 2017 May;107(5):1107-1112. doi: 10.1016/j.fertnstert.2017.03.019. Epub 2017 Apr 19.
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Non-invasive preimplantation genetic screening using array comparative genomic hybridization on spent culture media: a proof-of-concept pilot study.在废弃培养基上使用阵列比较基因组杂交进行无创胚胎植入前基因筛查:一项概念验证性初步研究。
Reprod Biomed Online. 2017 Jun;34(6):583-589. doi: 10.1016/j.rbmo.2017.03.015. Epub 2017 Mar 28.
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Analysis of implantation and ongoing pregnancy rates following the transfer of mosaic diploid-aneuploid blastocysts.嵌合二倍体-非整倍体囊胚移植后的着床率和持续妊娠率分析。
Hum Genet. 2017 Jul;136(7):805-819. doi: 10.1007/s00439-017-1797-4. Epub 2017 Apr 9.
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Characterizing nuclear and mitochondrial DNA in spent embryo culture media: genetic contamination identified.分析胚胎培养废弃液中的核 DNA 和线粒体 DNA:鉴定出遗传污染。
Fertil Steril. 2017 Jan;107(1):220-228.e5. doi: 10.1016/j.fertnstert.2016.10.015. Epub 2016 Nov 16.