Department of Orthodontics, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Department of Stomatology, Hwa Mei Hospital, University of Chinese Academy of Sciences, Ningbo, China.
J Clin Lab Anal. 2020 Mar;34(3):e23102. doi: 10.1002/jcla.23102. Epub 2019 Nov 19.
Epulis has a tumor-like appearance but is considered to be a massive reactive lesion rather than a true neoplasia. Limited information about the pathogenesis of epulis is available. The purpose of our study was to identify potential signaling pathways in fibrous epulis through transcriptome profiling.
Differentially expressed genes (DEGs) between fibrous epulis lesions and normal gingival tissues were detected using RNA sequencing (RNAseq). The expression levels of eighteen genes were validated using quantitative real-time PCR (qRT-PCR).
RNAseq identified 533 upregulated genes and 732 downregulated genes. The top 10 upregulated genes were IL11, OSM, MMP3, KRT75, MMP1, IL6, IL1B, IL24, SP7, and ADGRG3. The top 10 downregulated genes were BCHE, TYR, DCT, KRT222, RP11-507K12.1, COL6A5, PMP2, GFRA1, SCN7A, and CDH19. KEGG pathway analysis further indicated that the DEGs were enriched in "Pathways in cancer" and the "Ras signaling pathway". quantitative real-time PCR verified that the expression levels of SOS1, HRAS, PIK3CA, AKT3, IKBKA, IKBKB, NFKB1, BCL2, BCL2L1, XIAP, BIRC2, and BIRC3 were increased significantly.
The current transcriptomic profiling study reveals that in fibrous epulis, RAS-PI3K-AKT-NF-κB pathway transcriptionally regulates the expression of BCL2 family and IAP family genes, leading to increased proliferation and apoptosis inhibition.
龈瘤外观似肿瘤,但被认为是一种巨大的反应性病变,而不是真正的肿瘤。关于龈瘤的发病机制的信息有限。我们的研究目的是通过转录组谱分析确定纤维性龈瘤中的潜在信号通路。
使用 RNA 测序(RNAseq)检测纤维性龈瘤病变与正常牙龈组织之间的差异表达基因(DEGs)。使用定量实时 PCR(qRT-PCR)验证了 18 个基因的表达水平。
RNAseq 鉴定出 533 个上调基因和 732 个下调基因。上调基因的前 10 位分别为 IL11、OSM、MMP3、KRT75、MMP1、IL6、IL1B、IL24、SP7 和 ADGRG3。下调基因的前 10 位分别为 BCHE、TYR、DCT、KRT222、RP11-507K12.1、COL6A5、PMP2、GFRA1、SCN7A 和 CDH19。KEGG 途径分析进一步表明,DEGs 富集于“癌症途径”和“Ras 信号通路”。定量实时 PCR 验证 SOS1、HRAS、PIK3CA、AKT3、IKBKA、IKBKB、NFKB1、BCL2、BCL2L1、XIAP、BIRC2 和 BIRC3 的表达水平显著增加。
目前的转录组谱研究表明,在纤维性龈瘤中,RAS-PI3K-AKT-NF-κB 通路转录调控 BCL2 家族和 IAP 家族基因的表达,导致增殖增加和凋亡抑制。