Laboratory Molecules of Communication and Adaptation of Microorganisms (MCAM, UMR 7245 CNRS-MNHN), National Museum of Natural History (MNHN), CNRS, CP 54, 57 rue Cuvier 75005, Paris, France.
J Biol Chem. 2020 Jan 3;295(1):34-54. doi: 10.1074/jbc.REV119.006545. Epub 2019 Nov 29.
The ribosomally synthesized and posttranslationally modified peptides (RiPPs), also called ribosomal peptide natural products (RPNPs), form a growing superfamily of natural products that are produced by many different organisms and particularly by bacteria. They are derived from precursor polypeptides whose modification by various dedicated enzymes helps to establish a vast array of chemical motifs. RiPPs have attracted much interest as a source of potential therapeutic agents, and in particular as alternatives to conventional antibiotics to address the bacterial resistance crisis. However, their ecological roles in nature are poorly understood and explored. The present review describes major RiPP actors in competition within microbial communities, the main ecological and physiological functions currently evidenced for RiPPs, and the microbial ecosystems that are the sites for these functions. We envision that the study of RiPPs may lead to discoveries of new biological functions and highlight that a better knowledge of how bacterial RiPPs mediate inter-/intraspecies and interkingdom interactions will hold promise for devising alternative strategies in antibiotic development.
核糖体合成和翻译后修饰肽(RiPPs),也称为核糖体肽天然产物(RPNPs),形成了一个不断增长的天然产物超级家族,由许多不同的生物体产生,特别是细菌。它们来源于前体多肽,这些多肽通过各种专用酶的修饰有助于建立大量的化学基序。RiPPs 作为潜在治疗剂的来源引起了广泛关注,特别是作为传统抗生素的替代品,以解决细菌耐药性危机。然而,它们在自然界中的生态作用还知之甚少,探索得也不够充分。本文综述了微生物群落中竞争的主要 RiPP 因子、目前已证实的 RiPP 的主要生态和生理功能,以及这些功能的微生物生态系统。我们设想,对 RiPPs 的研究可能会发现新的生物学功能,并强调更好地了解细菌 RiPPs 如何介导种间/种内和种间的相互作用,将为设计抗生素开发的替代策略提供希望。