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致癌病毒可通过模拟界面重连信号通路来驱动癌症。

Oncoviruses Can Drive Cancer by Rewiring Signaling Pathways Through Interface Mimicry.

作者信息

Guven-Maiorov Emine, Tsai Chung-Jung, Nussinov Ruth

机构信息

Computational Structural Biology Section, Basic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD, United States.

Department of Human Genetics and Molecular Medicine, Sackler Institute of Molecular Medicine, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel.

出版信息

Front Oncol. 2019 Nov 15;9:1236. doi: 10.3389/fonc.2019.01236. eCollection 2019.

Abstract

Oncoviruses rewire host pathways to subvert host immunity and promote their survival and proliferation. However, exactly how is challenging to understand. Here, by employing the first and to date only interface-based host-microbe interaction (HMI) prediction method, we explore a pivotal strategy oncoviruses use to drive cancer: mimicking binding surfaces-interfaces-of human proteins. We show that oncoviruses can target key human network proteins and transform cells by acquisition of cancer hallmarks. Experimental large-scale mapping of HMIs is difficult and individual HMIs do not permit in-depth grasp of tumorigenic virulence mechanisms. Our computational approach is tractable and 3D structural HMI models can help elucidate pathogenesis mechanisms and facilitate drug design. We observe that many host proteins are unique targets for certain oncoviruses, whereas others are common to several, suggesting similar infectious strategies. A rough estimation of our false discovery rate based on the tissue expression of oncovirus-targeted human proteins is 25%.

摘要

肿瘤病毒会重新连接宿主通路,以颠覆宿主免疫并促进自身存活和增殖。然而,其具体机制却难以理解。在此,我们通过运用首个也是迄今为止唯一基于界面的宿主-微生物相互作用(HMI)预测方法,探索肿瘤病毒驱动癌症的关键策略:模仿人类蛋白质的结合表面——界面。我们发现肿瘤病毒能够靶向人类关键网络蛋白,并通过获得癌症特征来转化细胞。实验性大规模绘制HMI具有难度,且单个HMI无法深入掌握致瘤毒力机制。我们的计算方法易于处理,三维结构HMI模型有助于阐明发病机制并推动药物设计。我们观察到,许多宿主蛋白是某些肿瘤病毒的独特靶点,而其他一些则为多种病毒所共有,这表明存在相似的感染策略。基于肿瘤病毒靶向的人类蛋白质的组织表达,我们对错误发现率的粗略估计为25%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af5b/6872517/841f3efb9ddd/fonc-09-01236-g0001.jpg

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