Wachowiak Mark P, Moggridge Jason J, Wachowiak-Smolikova Renata
Annu Int Conf IEEE Eng Med Biol Soc. 2019 Jul;2019:4584-4587. doi: 10.1109/EMBC.2019.8857515.
The analysis and interpretation of physiological signals acquired non-invasively are increasingly important in Smart Health, precision medicine, and medical research. However, this analysis is hampered due to the length, complexity, and inter-subject variation of these signals, and, consequently, dimensionality reduction and clustering offer substantial benefits. Machine learning, used widely in biomedicine, is increasingly being applied to physiological time series. Among the applications of unsupervised learning, clustering is one of the most important. In this paper, an unsupervised autoen-coder architecture, deep convolutional embedded clustering, is presented as a data-driven approach to study time-frequency characteristics of heart rate variability records. An autoen-coder network is trained on continuous wavelet transforms of heart rate variability signals calculated from publicly-available annotated ECG records with a wide variety of conditions. The latent variables learned by the clustering autoencoder are low-dimensional representations of wavelet transform characteristics that can be visualized and further analyzed. The results indicate that the learned clusters correspond to beat morphologies in the electrocardiogram in many cases, but also that the reduced dimensions of the time-frequency features can potentially provide additional insights into cardiac activity and the autonomic nervous system.
在智能健康、精准医学和医学研究中,对通过非侵入性获取的生理信号进行分析和解释变得越来越重要。然而,由于这些信号的长度、复杂性和个体间差异,这种分析受到了阻碍,因此,降维和聚类具有显著的优势。机器学习在生物医学中广泛应用,越来越多地被应用于生理时间序列。在无监督学习的应用中,聚类是最重要的应用之一。本文提出了一种无监督自动编码器架构——深度卷积嵌入聚类,作为一种数据驱动的方法来研究心率变异性记录的时频特征。使用公开可用的带有各种情况注释的心电图记录计算出的心率变异性信号的连续小波变换,对自动编码器网络进行训练。聚类自动编码器学习到的潜在变量是小波变换特征的低维表示,可以进行可视化并进一步分析。结果表明,在许多情况下,学习到的聚类对应于心电图中的搏动形态,而且时频特征的降维可能会为心脏活动和自主神经系统提供额外的见解。