Biosciences Institute, Newcastle University, Newcastle Upon Tyne, UK.
Department of Mechanical & Manufacturing Engineering, University of Cyprus, Nicosia, Cyprus.
Methods. 2021 Jan;185:94-104. doi: 10.1016/j.ymeth.2020.01.006. Epub 2020 Jan 23.
This paper develops a three-dimensional in silico hybrid model of cancer, which describes the multi-variate phenotypic behaviour of tumour and host cells. The model encompasses the role of cell migration and adhesion, the influence of the extracellular matrix, the effects of oxygen and nutrient availability, and the signalling triggered by chemical cues and growth factors. The proposed in silico hybrid modelling framework combines successfully the advantages of continuum-based and discrete methods, namely the finite element and agent-based method respectively. The framework is thus used to realistically model cancer mechano-biology in a multiscale fashion while maintaining the resolution power of each method in a computationally cost-effective manner. The model is tailored to simulate glioma progression, and is subsequently used to interrogate the balance between the host cells and small sized gliomas, while the go-or-grow phenotype characteristic in glioblastomas is also investigated. Also, cell-cell and cell-matrix interactions are examined with respect to their effect in (macroscopic) tumour growth, brain tissue perfusion and tumour necrosis. Finally, we use the in silico framework to assess differences between low-grade and high-grade glioma growth, demonstrating significant differences in the distribution of cancer as well as host cells, in accordance with reported experimental findings.
本文开发了一个癌症的三维计算混合模型,该模型描述了肿瘤和宿主细胞的多变量表型行为。该模型包括细胞迁移和黏附的作用、细胞外基质的影响、氧和营养物质可用性的影响以及化学信号和生长因子触发的信号转导。所提出的计算混合建模框架成功地结合了基于连续体和离散方法的优势,分别是有限元和基于主体的方法。因此,该框架用于以多尺度的方式逼真地模拟癌症力学生物学,同时以计算成本有效的方式保持每种方法的分辨率能力。该模型经过定制以模拟神经胶质瘤的进展,随后用于研究宿主细胞和小尺寸神经胶质瘤之间的平衡,同时还研究了神经胶质母细胞瘤中特征性的生长或消退表型。此外,还研究了细胞-细胞和细胞-基质相互作用对(宏观)肿瘤生长、脑组织灌注和肿瘤坏死的影响。最后,我们使用计算框架评估低级别和高级别神经胶质瘤生长之间的差异,根据报道的实验结果,证明了癌症以及宿主细胞分布的显著差异。