Choi Boo-Kyeong, Madusanka Nuwan, Choi Heung-Kook, So Jae-Hong, Kim Cho-Hee, Park Hyeon-Gyun, Bhattacharjee Subrata, Prakash Deekshitha
Department of Digital Anti-Aging Healthcare, u-AHRC, Inje University, Gimhae, Korea.
Department of Computer Engineering, u-AHRC, Inje University, Gimhae, Korea.
Curr Med Imaging Rev. 2020;16(1):27-35. doi: 10.2174/1573405615666191021123854.
In this study, we used a convolutional neural network (CNN) to classify Alzheimer's disease (AD), mild cognitive impairment (MCI), and normal control (NC) subjects based on images of the hippocampus region extracted from magnetic resonance (MR) images of the brain.
The datasets used in this study were obtained from the Alzheimer's Disease Neuroimaging Initiative (ADNI). To segment the hippocampal region automatically, the patient brain MR images were matched to the International Consortium for Brain Mapping template (ICBM) using 3D-Slicer software. Using prior knowledge and anatomical annotation label information, the hippocampal region was automatically extracted from the brain MR images.
The area of the hippocampus in each image was preprocessed using local entropy minimization with a bi-cubic spline model (LEMS) by an inhomogeneity intensity correction method. To train the CNN model, we separated the dataset into three groups, namely AD/NC, AD/MCI, and MCI/NC. The prediction model achieved an accuracy of 92.3% for AD/NC, 85.6% for AD/MCI, and 78.1% for MCI/NC.
The results of this study were compared to those of previous studies, and summarized and analyzed to facilitate more flexible analyses based on additional experiments. The classification accuracy obtained by the proposed method is highly accurate. These findings suggest that this approach is efficient and may be a promising strategy to obtain good AD, MCI and NC classification performance using small patch images of hippocampus instead of whole slide images.
在本研究中,我们使用卷积神经网络(CNN),基于从大脑磁共振(MR)图像中提取的海马区图像,对阿尔茨海默病(AD)、轻度认知障碍(MCI)和正常对照(NC)受试者进行分类。
本研究中使用的数据集来自阿尔茨海默病神经影像学倡议(ADNI)。为了自动分割海马区,使用3D-Slicer软件将患者脑部MR图像与国际脑图谱联盟模板(ICBM)进行匹配。利用先验知识和解剖注释标签信息,从脑部MR图像中自动提取海马区。
通过非均匀强度校正方法,使用双三次样条模型的局部熵最小化(LEMS)对每个图像中海马区的面积进行预处理。为了训练CNN模型,我们将数据集分为三组,即AD/NC、AD/MCI和MCI/NC。预测模型在AD/NC组的准确率为92.3%,在AD/MCI组为85.6%,在MCI/NC组为78.1%。
将本研究结果与以往研究结果进行比较,并进行总结和分析,以便基于更多实验进行更灵活的分析。所提方法获得的分类准确率非常高。这些发现表明,这种方法是有效的,并且可能是一种有前景的策略,即使用海马区的小补丁图像而非整张切片图像来获得良好的AD、MCI和NC分类性能。