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顺铂耐药 AGS 和 MKN-28 胃癌细胞系的功能和转录组学特征。

Functional and transcriptomic characterization of cisplatin-resistant AGS and MKN-28 gastric cancer cell lines.

机构信息

Laboratory of Integrative Biology (LIBi), Scientific and Technological Bioresource Nucleus- Center for Excellence in Translational Medicine (BIOREN-CEMT), Universidad de La Frontera, Temuco, Chile.

Dirección de Investigación, Vicerrectoría de Investigación y Postgrado, Universidad Autónoma de Chile, Temuco, Chile.

出版信息

PLoS One. 2020 Jan 28;15(1):e0228331. doi: 10.1371/journal.pone.0228331. eCollection 2020.

Abstract

Gastric cancer (GC) is a significant cancer-related cause of death worldwide. The most used chemotherapeutic regimen in GC is based on platinum drugs such as cisplatin (CDDP). However, CDDP resistance reduces advanced GC survival. In vitro drug-resistant cell model would help in the understanding of molecular mechanisms underlying this drug-resistance phenomenon. The aim of this study was to characterize new models of CDDP-resistant GC cell lines (AGS R-CDDP and MKN-28 R-CDDP) obtained through a stepwise increasing drug doses method, in order to understand the molecular mechanisms underlying chemoresistance as well as identify new therapeutic targets for the treatment of GC. Cell viability assays, cell death assays and the expression of resistance molecular markers confirmed that AGS R-CDDP and MKN-28 R-CDDP are reliable CDDP-resistant models. RNA-seq and bioinformatics analyses identified a total of 189 DEGs, including 178 up-regulated genes and 11 down-regulated genes, associated mainly to molecular functions involved in CDDP-resistance. DEGs were enriched in 23 metabolic pathways, among which the most enriched was the inflammation mediated by chemokine and cytokine signaling pathway. Finally, the higher mRNA expression of SERPINA1, BTC and CCL5, three up-regulated DEGs associated to CDDP resistance found by RNA-seq analysis was confirmed. In summary, this study showed that AGS R-CDDP and MKN-28 R-CDDP are reliable models of CDDP resistance because resemble many of resistant phenotype in GC, being also useful to assess potential therapeutic targets for the treatment of gastric cancers resistant to CDDP. In addition, we identified several DEGs associated with molecular functions such as binding, catalytic activity, transcription regulator activity and transporter activity, as well as signaling pathways associated with inflammation process, which could be involved in the development of CDDP resistance in GC. Further studies are necessary to clarify the role of inflammatory processes in GC resistant to CDDP and these models could be useful for these purposes.

摘要

胃癌(GC)是全球范围内导致癌症相关死亡的重要原因。GC 最常用的化疗方案基于铂类药物,如顺铂(CDDP)。然而,CDDP 耐药会降低晚期 GC 的生存率。体外耐药细胞模型有助于理解这种耐药现象的分子机制。本研究的目的是通过逐步增加药物剂量的方法,对获得的新的 CDDP 耐药 GC 细胞系(AGS R-CDDP 和 MKN-28 R-CDDP)进行特征描述,以了解化学耐药的分子机制,并为 GC 的治疗确定新的治疗靶点。细胞活力测定、细胞死亡测定和耐药分子标志物的表达证实,AGS R-CDDP 和 MKN-28 R-CDDP 是可靠的 CDDP 耐药模型。RNA-seq 和生物信息学分析共鉴定出 189 个差异表达基因(DEGs),包括 178 个上调基因和 11 个下调基因,主要与参与 CDDP 耐药的分子功能有关。DEGs 富集在 23 个代谢途径中,其中最富集的是趋化因子和细胞因子信号转导途径介导的炎症。最后,通过 RNA-seq 分析发现,三个与 CDDP 耐药相关的上调 DEGs,即 SERPINA1、BTC 和 CCL5 的 mRNA 表达水平较高。综上所述,本研究表明,AGS R-CDDP 和 MKN-28 R-CDDP 是可靠的 CDDP 耐药模型,因为它们在 GC 中具有许多耐药表型,也可用于评估对 CDDP 耐药的胃癌的潜在治疗靶点。此外,我们鉴定了一些与分子功能(如结合、催化活性、转录调节活性和转运活性)以及与炎症过程相关的信号通路相关的 DEGs,这些 DEGs可能参与 GC 中 CDDP 耐药的发展。需要进一步的研究来阐明 CDDP 耐药的 GC 中炎症过程的作用,这些模型可能对此类研究有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/88a7/6986722/7b28dace3389/pone.0228331.g001.jpg

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