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循环 RNA 在与血小板活性相关的心力衰竭患者血浆中的表达谱。

Circular RNA Expression Profiles in Plasma from Patients with Heart Failure Related to Platelet Activity.

机构信息

US-China Institute for Translational Medicine, College of Pharmacy, Binzhou Medical University, Yantai, 264000, China.

Department of Cell Biology, College of Life Science, Yantai University, Yantai, 264005, China.

出版信息

Biomolecules. 2020 Jan 25;10(2):187. doi: 10.3390/biom10020187.

Abstract

Heart failure (HF) is a deadly disease that is difficult to accurately diagnose. Circular RNAs (circRNAs) are a novel class of noncoding RNAs that might play important roles in many cardiovascular diseases. However, their role in HF remains unclear. CircRNA microarrays were performed on plasma samples obtained from three patients with HF and three healthy controls. The profiling results were validated by quantitative reverse transcription polymerase chain reaction. The diagnostic value of circRNAs for HF was evaluated by receiver operating characteristic (ROC) curves. The expression profiles indicated that 477 circRNAs were upregulated and 219 were downregulated in the plasma of patients with HF compared with healthy controls. Among the dysregulated circRNAs, hsa_circ_0112085 (p = 0.0032), hsa_circ_0062960 (p = 0.0006), hsa_circ_0053919 (p = 0.0074) and hsa_circ_0014010 (p = 0.025) showed significantly higher expression in patients with HF compared with healthy controls. The area under the ROC curve for hsa_circ_0062960 for HF diagnosis was 0.838 ( < 0.0001). Correlation analysis showed that the expression of hsa_circ_0062960 was highly correlated with B-type natriuretic peptide (BNP) serum levels. Some differential circRNAs were found to be related to platelet activity by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. The landscape of circRNA expression profiles may play a role in HF pathogenesis and improve our understanding of platelet function in HF. Moreover, hsa_circ_0062960 has potential as a novel diagnostic biomarker for HF.

摘要

心力衰竭(HF)是一种难以准确诊断的致命疾病。环状 RNA(circRNA)是一类新型的非编码 RNA,可能在许多心血管疾病中发挥重要作用。然而,它们在 HF 中的作用尚不清楚。对来自 3 名 HF 患者和 3 名健康对照者的血浆样本进行了 circRNA 微阵列分析。通过定量逆转录聚合酶链反应对分析结果进行了验证。通过受试者工作特征(ROC)曲线评估了 circRNA 对 HF 的诊断价值。表达谱分析表明,与健康对照组相比,HF 患者血浆中有 477 个 circRNA 上调,219 个 circRNA 下调。在失调的 circRNA 中,hsa_circ_0112085(p=0.0032)、hsa_circ_0062960(p=0.0006)、hsa_circ_0053919(p=0.0074)和 hsa_circ_0014010(p=0.025)在 HF 患者中的表达明显高于健康对照组。hsa_circ_0062960 用于 HF 诊断的 ROC 曲线下面积为 0.838(<0.0001)。相关性分析表明,hsa_circ_0062960 的表达与 B 型利钠肽(BNP)血清水平高度相关。通过基因本体论(GO)和京都基因与基因组百科全书(KEGG)通路分析发现,一些差异表达的 circRNA 与血小板活性有关。circRNA 表达谱的全貌可能在 HF 发病机制中发挥作用,并加深我们对 HF 中血小板功能的理解。此外,hsa_circ_0062960 可能作为 HF 的新型诊断生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7e13/7072558/ede57030aa23/biomolecules-10-00187-g001.jpg

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