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一种新型的参与磷脂合成调控的碱性螺旋-环-螺旋转录因子的鉴定与表征

Identification and Characterization of a Novel Basic Helix-Loop-Helix Transcription Factor of Phospholipid Synthesis Regulation in .

作者信息

Dong Hongzhi, Yu Dou, Wang Bin, Pan Li

机构信息

School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China.

Guangdong Provincial Key Laboratory of Fermentation and Enzyme Engineering, South China University of Technology, Guangzhou, China.

出版信息

Front Microbiol. 2020 Jan 9;10:2985. doi: 10.3389/fmicb.2019.02985. eCollection 2019.

Abstract

The synthesis of phospholipids relies on a sort of genes, whose promoter regions contain inositol-sensitive upstream activation sequence (UAS) and are regulated by the basic helix-loop-helix (bHLH)-type transcription factor (TF) pair. Ten putative bHLH TFs have been found through whole genome sequencing of , but none of these TFs have been characterized. In this study, we identified and characterized the bHLH-type TF in Electrophoretic mobility shift assay (EMSA) and yeast two-hybrid assay demonstrated that functions as a homodimer in UAS genes (e.g., and ) and binds to . Real-time quantitative PCR of and quantification of total phospholipid indicated that the disruptant downregulated the transcription of and the amount of total cellular phosphatidylinositol. In addition, phenotype analyses showed that a loss of led to resistance to cell wall interference and DNA damage. Comparative transcriptome analyses showed that more than 1000 genes and GO terms associated with UAS, endoplasmic reticulum-associated protein degradation, phosphatidylinositol synthesis, chitin synthesis, and fatty acid synthesis were differentially expressed in Δino2 compared to the wild type (WT). Taken together, these observations indicate that the bHLH TF functions as a homodimer that regulates the synthesis of phosphatidylinositol, fatty acid, and chitin and influences the homeostasis of the endoplasmic reticulum membrane.

摘要

磷脂的合成依赖于一类基因,其启动子区域含有肌醇敏感的上游激活序列(UAS),并受碱性螺旋-环-螺旋(bHLH)型转录因子(TF)对的调控。通过[物种名称]的全基因组测序发现了10个推定的bHLH TF,但这些TF均未得到表征。在本研究中,我们对[物种名称]中的bHLH型TF进行了鉴定和表征。电泳迁移率变动分析(EMSA)和酵母双杂交分析表明,[TF名称]在UAS基因(如[基因名称1]和[基因名称2])中作为同二聚体发挥作用,并与[结合位点名称]结合。[基因名称]的实时定量PCR和总磷脂定量表明,[TF名称]缺失突变体下调了[基因名称]的转录以及细胞总磷脂酰肌醇的量。此外,表型分析表明,[TF名称]的缺失导致对细胞壁干扰和DNA损伤具有抗性。比较转录组分析表明,与野生型(WT)相比,在Δino2中,超过1000个与UAS、内质网相关蛋白降解、磷脂酰肌醇合成、几丁质合成和脂肪酸合成相关的基因和基因本体(GO)术语存在差异表达。综上所述,这些观察结果表明,bHLH TF[TF名称]作为同二聚体发挥作用,调节磷脂酰肌醇、脂肪酸和几丁质的合成,并影响内质网膜的稳态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/23e7/6962311/454e63011f48/fmicb-10-02985-g001.jpg

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