Center for Free-Electron Laser Science (CFEL), Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607, Hamburg, Germany.
Paul Scherrer Institute (PSI), Forschungstrasse 111, 5232, Villigen, PSI, Switzerland.
Nat Commun. 2020 Jan 30;11(1):620. doi: 10.1038/s41467-020-14484-w.
Sleeping sickness is a fatal disease caused by the protozoan parasite Trypanosoma brucei (Tb). Inosine-5'-monophosphate dehydrogenase (IMPDH) has been proposed as a potential drug target, since it maintains the balance between guanylate deoxynucleotide and ribonucleotide levels that is pivotal for the parasite. Here we report the structure of TbIMPDH at room temperature utilizing free-electron laser radiation on crystals grown in living insect cells. The 2.80 Å resolution structure reveals the presence of ATP and GMP at the canonical sites of the Bateman domains, the latter in a so far unknown coordination mode. Consistent with previously reported IMPDH complexes harboring guanosine nucleotides at the second canonical site, TbIMPDH forms a compact oligomer structure, supporting a nucleotide-controlled conformational switch that allosterically modulates the catalytic activity. The oligomeric TbIMPDH structure we present here reveals the potential of in cellulo crystallization to identify genuine allosteric co-factors from a natural reservoir of specific compounds.
昏睡病是一种由原生动物寄生虫布氏锥虫(Tb)引起的致命疾病。肌苷-5'-单磷酸脱氢酶(IMPDH)已被提议作为一种潜在的药物靶点,因为它维持了鸟苷酸脱氧核苷酸和核苷酸水平之间的平衡,这对寄生虫至关重要。在这里,我们利用活昆虫细胞中生长的晶体的自由电子激光辐射,在室温下报告了 TbIMPDH 的结构。分辨率为 2.80Å的结构揭示了 ATP 和 GMP 存在于 Bateman 结构域的典型位点,后者处于一种迄今为止未知的配位模式。与先前报道的含有第二个典型位点鸟嘌呤核苷酸的 IMPDH 复合物一致,TbIMPDH 形成一个紧凑的寡聚体结构,支持核苷酸控制的构象开关,这种开关变构调节催化活性。我们在这里呈现的寡聚 TbIMPDH 结构揭示了在细胞内结晶从天然特定化合物库中识别真正的变构辅助因子的潜力。