Department of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
The State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China.
Aging (Albany NY). 2020 Feb 3;12(3):2132-2141. doi: 10.18632/aging.102728.
Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response.
膀胱癌是全球发病率和死亡率较高的疾病之一。目前,免疫疗法已成为膀胱癌治疗的一种有价值的治疗方法。肿瘤突变负荷(TMB)已被认为是预测免疫治疗的最常见生物标志物。膀胱癌的突变率据报道位居第三。然而,这些基因突变是否与 TMB 和免疫反应有关尚不清楚。在这项研究中,我们从癌症基因组图谱(TCGA)和国际癌症基因组联合会(ICGC)数据库中下载了膀胱癌的体细胞突变数据,发现 11 个经常发生突变的基因被两个队列所覆盖,包括 FGFR3、TTN、XIRP2、CREBBP、PIK3CA、TP53、MUC16、EP300(E1A 结合蛋白 P300)、ARID1A、ERBB2 和 KDM6A。其中,EP300 突变与更高的 TMB 相关,并提示预后良好。此外,基于基因集富集分析(GSEA)和 CIBERSORT 算法,我们观察到 EP300 突变上调了参与免疫系统的信号通路,并增强了抗肿瘤免疫反应。总之,EP300 在膀胱癌中经常发生突变,其突变与增加的 TMB 相关,并促进抗肿瘤免疫,可作为预测免疫反应的生物标志物。