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黏蛋白 4 突变与肿瘤突变负担相关,并促进结肠癌患者的抗肿瘤免疫。

Mucin 4 mutation is associated with tumor mutation burden and promotes antitumor immunity in colon cancer patients.

机构信息

Department of Gastrointestinal Surgery, The Second Affiliated Hospital of Chongqing Medical University, Chongqing 400010, China.

Department of Clinical Nutrition, The Second Affiliated Hospital of Chongqing Medical University, Chongqing 400010, China.

出版信息

Aging (Albany NY). 2021 Mar 14;13(6):9043-9055. doi: 10.18632/aging.202756.

Abstract

At present, immunotherapy is widely used for different mismatch repair (dMMR) or highly microsatellite instability (MSI-H) colorectal cancer patients, and tumor mutation burden (TMB) is a valuable independent predictor of response to immunotherapy. However, specific gene mutations and their relationship with TMB and tumor-infiltrating immune cells in colon cancer remains unclear. In the present study, we analyzed somatic mutation data of colon cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found that 17 frequently mutated genes were occurred in both cohorts, including APC, TP53, TNN, KRAS, MUC16, MUC4 (mucin 4), SYNE1, FLG, FAT4, OBSCN, FAT3, RYR2, PIK3CA, FBXW7, DNAH11, MUC5B and ZFHX4. Interestingly, only MUC4 mutation was associated with higher TMB and patient clinical prognosis among the 17 mutated genes. Moreover, according to gene set enrichment analysis (GSEA) and the CIBERSORT algorithm, we revealed that MUC4 mutation activated signaling pathways involved in the immune system and enhanced the antitumor immune response. In conclusion, MUC4 may have important clinical implications for immune therapy of colon cancer.

摘要

目前,免疫疗法广泛应用于不同错配修复(dMMR)或高度微卫星不稳定(MSI-H)结直肠癌患者,肿瘤突变负荷(TMB)是免疫治疗反应的有价值的独立预测因子。然而,结肠癌中特定基因的突变及其与 TMB 和肿瘤浸润免疫细胞的关系仍不清楚。在本研究中,我们分析了来自癌症基因组图谱(TCGA)和国际癌症基因组联盟(ICGC)数据集的结肠癌体细胞突变数据,发现 17 个经常发生突变的基因在两个队列中均存在,包括 APC、TP53、TNN、KRAS、MUC16、MUC4(粘蛋白 4)、SYNE1、FLG、FAT4、OBSCN、FAT3、RYR2、PIK3CA、FBXW7、DNAH11、MUC5B 和 ZFHX4。有趣的是,在这 17 个突变基因中,只有 MUC4 突变与更高的 TMB 和患者临床预后相关。此外,根据基因集富集分析(GSEA)和 CIBERSORT 算法,我们揭示了 MUC4 突变激活了涉及免疫系统的信号通路,并增强了抗肿瘤免疫反应。总之,MUC4 可能对结肠癌的免疫治疗具有重要的临床意义。

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