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从中国江西西部的本土猪中鉴定出属于肠道病毒 A 种的新型基因型。

Identification of novel genotypes belonging to the species Teschovirus A from indigenous pigs in western Jiangxi, China.

机构信息

College of Life Sciences and Resource Environment, Yichun University, Yichun, 336000, Jiangxi, China.

出版信息

Arch Virol. 2020 Apr;165(4):993-1001. doi: 10.1007/s00705-020-04525-6. Epub 2020 Feb 10.

Abstract

Teschovirus A is currently the sole species in the genus Teschovirus, whose members are divided into 13 subtypes: porcine teschovirus (PTV) 1-13. However, recent discoveries of novel PTV genotypes have suggested that a new species, "Teschovirus B", should be established. Here, we have identified six of the 19 known genotypes and two novel genotypes (PTV 17-18), revealing the high genetic diversity of the PTV subpopulation in indigenous pigs of western Jiangxi, China. Moreover, we determined the nearly complete genome sequences of PTV 17-SG9 and PTV 18-SG10. Together with PTV 1-13, these novel genotypes were confirmed to be members of the species Teschovirus A based on phylogenetic and genetic divergence analysis. Consequently, the species Teschovirus A now includes at least 15 PTV genotypes.

摘要

肠道病毒 A 目前是肠道病毒属中唯一的物种,其成员分为 13 个亚型:猪肠道病毒(PTV)1-13。然而,最近发现的新型 PTV 基因型表明,应该建立一个新的物种“肠道病毒 B”。在这里,我们鉴定了已知的 19 种基因型中的 6 种和 2 种新型基因型(PTV 17-18),揭示了中国江西西部土猪中 PTV 亚群的高度遗传多样性。此外,我们确定了 PTV 17-SG9 和 PTV 18-SG10 的近乎完整基因组序列。与 PTV 1-13 一起,这些新型基因型基于系统发育和遗传分歧分析被确认为肠道病毒 A 种的成员。因此,肠道病毒 A 种现在至少包括 15 种 PTV 基因型。

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