Dong Zhen, Pu Longjun, Cui Hongjuan
State Key Laboratory of Silkworm Genome Biology, Institute of Sericulture and Systems Biology, Southwest University, Chongqing, China.
Cancer Center, Medical Research Institute, Southwest University, Chongqing, China.
Front Cell Dev Biol. 2020 Jan 23;8:4. doi: 10.3389/fcell.2020.00004. eCollection 2020.
In human beings, there is a ∼16,569 bp circular mitochondrial DNA (mtDNA) encoding 22 tRNAs, 12S and 16S rRNAs, 13 polypeptides that constitute the central core of ETC/OxPhos complexes, and some non-coding RNAs. Recently, mtDNA has been shown to have some covalent modifications such as methylation or hydroxylmethylation, which play pivotal epigenetic roles in mtDNA replication and transcription. Post-translational modifications of proteins in mitochondrial nucleoids such as mitochondrial transcription factor A (TFAM) also emerge as essential epigenetic modulations in mtDNA replication and transcription. Post-transcriptional modifications of mitochondrial RNAs (mtRNAs) including mt-rRNAs, mt-tRNAs and mt-mRNAs are important epigenetic modulations. Besides, mtDNA or nuclear DNA (n-DNA)-derived non-coding RNAs also play important roles in the regulation of translation and function of mitochondrial genes. These evidences introduce a novel concept of mitoepigenetics that refers to the study of modulations in the mitochondria that alter heritable phenotype in mitochondria itself without changing the mtDNA sequence. Since mitochondrial dysfunction contributes to carcinogenesis and tumor development, mitoepigenetics is also essential for cancer. Understanding the mode of actions of mitoepigenetics in cancers may shade light on the clinical diagnosis and prevention of these diseases. In this review, we summarize the present study about modifications in mtDNA, mtRNA and nucleoids and modulations of mtDNA/nDNA-derived non-coding RNAs that affect mtDNA translation/function, and overview recent studies of mitoepigenetic alterations in cancer.
在人类中,存在一个约16,569碱基对的环状线粒体DNA(mtDNA),它编码22种转运RNA(tRNA)、12S和16S核糖体RNA(rRNA)、构成电子传递链/氧化磷酸化(ETC/OxPhos)复合体核心的13种多肽以及一些非编码RNA。最近,mtDNA已被证明存在一些共价修饰,如甲基化或羟甲基化,这些修饰在线粒体DNA复制和转录中发挥着关键的表观遗传作用。线粒体类核中蛋白质的翻译后修饰,如线粒体转录因子A(TFAM),也成为线粒体DNA复制和转录中必不可少的表观遗传调控。线粒体RNA(mtRNA)的转录后修饰,包括线粒体rRNA(mt-rRNA)、线粒体tRNA(mt-tRNA)和线粒体信使RNA(mt-mRNA),是重要的表观遗传调控。此外,mtDNA或核DNA(n-DNA)衍生的非编码RNA在线粒体基因的翻译和功能调控中也发挥着重要作用。这些证据引入了一个新的线粒体表观遗传学概念,即研究线粒体中改变线粒体自身可遗传表型而不改变mtDNA序列的调控。由于线粒体功能障碍与癌症发生和肿瘤发展有关,线粒体表观遗传学对癌症也至关重要。了解线粒体表观遗传学在癌症中的作用模式可能为这些疾病 的临床诊断和预防提供线索。在这篇综述中,我们总结了目前关于mtDNA、mtRNA和类核修饰以及影响mtDNA翻译/功能的mtDNA/nDNA衍生非编码RNA调控的研究,并概述了癌症中线粒体表观遗传改变的最新研究。