LongQC：第三代测序长读段数据质量控制工具。
LongQC: A Quality Control Tool for Third Generation Sequencing Long Read Data.
机构信息
King Abdullah University of Science and Technology (KAUST), Core Labs, Thuwal, Makkah, Saudi Arabia, 23955-6900
King Abdullah University of Science and Technology (KAUST), Core Labs, Thuwal, Makkah, Saudi Arabia, 23955-6900.
出版信息
G3 (Bethesda). 2020 Apr 9;10(4):1193-1196. doi: 10.1534/g3.119.400864.
We propose LongQC as an easy and automated quality control tool for genomic datasets generated by third generation sequencing (TGS) technologies such as Oxford Nanopore technologies (ONT) and SMRT sequencing from Pacific Bioscience (PacBio). Key statistics were optimized for long read data, and LongQC covers all major TGS platforms. LongQC processes and visualizes those statistics automatically and quickly.
我们提出 LongQC 作为一种简单而自动化的质量控制工具，适用于第三代测序（TGS）技术生成的基因组数据集，例如牛津纳米孔技术（ONT）和太平洋生物科学公司（PacBio）的 SMRT 测序。关键统计数据针对长读数据进行了优化，而 LongQC 涵盖了所有主要的 TGS 平台。LongQC 自动快速地处理和可视化这些统计信息。
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