Buechner Philipp, Hinderer Marc, Unberath Philipp, Metzger Patrick, Boeker Martin, Acker Till, Haller Florian, Mack Elisabeth, Nowak Daniel, Paret Claudia, Schanze Denny, von Bubnoff Nikolas, Wagner Sebastian, Busch Hauke, Boerries Melanie, Christoph Jan
Department of Medical Informatics, Friedrich-Alexander-University Erlangen-Nürnberg (FAU), 91058 Erlangen-Tennenlohe, Germany.
Institute of Medical Bioinformatics and Systems Medicine, Faculty of Medicine and Medical Center-University of Freiburg, 79110 Freiburg, Germany.
Diagnostics (Basel). 2020 Feb 10;10(2):93. doi: 10.3390/diagnostics10020093.
Clinicians in molecular tumor boards (MTB) are confronted with a growing amount of genetic high-throughput sequencing data. Today, at German university hospitals, these data are usually handled in complex spreadsheets from which clinicians have to obtain the necessary information. The aim of this work was to gather a comprehensive list of requirements to be met by cBioPortal to support processes in MTBs according to clinical needs. Therefore, oncology experts at nine German university hospitals were surveyed in two rounds of interviews. To generate an interview guideline a scoping review was conducted. For visual support in the second round, screenshot mockups illustrating the requirements from the first round were created. Requirements that cBioPortal already meets were skipped during the second round. In the end, 24 requirements with sometimes several conceivable options were identified and 54 screenshot mockups were created. Some of the identified requirements have already been suggested to the community by other users or are currently being implemented in cBioPortal. This shows, that the results are in line with the needs expressed by various disciplines. According to our findings, cBioPortal has the potential to significantly improve the processes and analyses of an MTB after the implementation of the identified requirements.
分子肿瘤学委员会(MTB)的临床医生面临着越来越多的基因高通量测序数据。如今,在德国大学医院,这些数据通常在复杂的电子表格中处理,临床医生必须从中获取必要信息。这项工作的目的是收集一份全面的需求清单,以使cBioPortal能够根据临床需求支持MTB中的流程。因此,对德国九所大学医院的肿瘤学专家进行了两轮访谈。为制定访谈指南,进行了一次范围界定审查。为了在第二轮访谈中提供视觉支持,制作了说明第一轮需求的屏幕截图模型。在第二轮访谈中跳过了cBioPortal已经满足的需求。最终,确定了24项需求,有时还有几个可设想的选项,并创建了54个屏幕截图模型。一些已确定的需求已经被其他用户向社区提出,或者目前正在cBioPortal中实施。这表明,结果与各学科表达的需求一致。根据我们的研究结果,在实施已确定的需求后,cBioPortal有潜力显著改善MTB的流程和分析。