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肠道病毒组与肠道癌变

Enteric Virome and Carcinogenesis in the Gut.

机构信息

, Huntingdon, USA.

出版信息

Dig Dis Sci. 2020 Mar;65(3):852-864. doi: 10.1007/s10620-020-06126-4.

DOI:10.1007/s10620-020-06126-4
PMID:32060814
Abstract

Colorectal cancer (CRC) is a leading cause of cancer-related deaths in both the USA and the world. Recent research has demonstrated the involvement of the gut microbiota in CRC development and progression. Microbial biomarkers of disease have focused primarily on the bacterial component of the microbiome; however, the viral portion of the microbiome, consisting of both bacteriophages and eukaryotic viruses, together known as the virome, has been lesser studied. Here we review the recent advancements in high-throughput sequencing (HTS) technologies and bioinformatics, which have enabled scientists to better understand how viruses might influence the development of colorectal cancer. We discuss the contemporary findings revealing modulations in the virome and their correlation with CRC development and progression. While a variety of challenges still face viral HTS detection in clinical specimens, we consider herein numerous next steps for future basic and clinical research. Clinicians need to move away from a single infectious agent model for disease etiology by grasping new, more encompassing etiological paradigms, in which communities of various microbial components interact with each other and the host. The reporting and indexing of patient health information, socioeconomic data, and other relevant metadata will enable identification of predictive variables and covariates of viral presence and CRC development. Altogether, the virome has a more profound role in carcinogenesis and cancer progression than once thought, and viruses, specific for either human cells or bacteria, are clinically relevant in understanding CRC pathology, patient prognosis, and treatment development.

摘要

结直肠癌(CRC)是美国和全球癌症相关死亡的主要原因。最近的研究表明,肠道微生物群与 CRC 的发生和发展有关。疾病的微生物生物标志物主要集中在微生物组的细菌组成部分上;然而,微生物组的病毒部分,包括噬菌体和真核病毒,统称为病毒组,研究较少。在这里,我们回顾了高通量测序(HTS)技术和生物信息学的最新进展,这些技术使科学家能够更好地了解病毒如何影响结直肠癌的发展。我们讨论了当代发现的病毒组的调节及其与 CRC 发生和发展的相关性。虽然病毒 HTS 在临床标本中的检测仍然面临各种挑战,但我们在此考虑了未来基础和临床研究的许多下一步措施。临床医生需要通过掌握新的、更全面的病因学范例,摆脱单一传染病原体模型来研究疾病病因,在这些范例中,各种微生物成分与宿主相互作用。患者健康信息、社会经济数据和其他相关元数据的报告和索引将能够识别病毒存在和 CRC 发展的预测变量和协变量。总之,与以前的观点相比,病毒组在致癌作用和癌症进展中起着更深远的作用,针对人类细胞或细菌的病毒在理解 CRC 病理学、患者预后和治疗开发方面具有临床意义。

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2
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Alterations in colorectal cancer virome and its persistence after surgery.结直肠癌病毒组的改变及其在手术后的持续存在。

本文引用的文献

1
Human Virome and Disease: High-Throughput Sequencing for Virus Discovery, Identification of Phage-Bacteria Dysbiosis and Development of Therapeutic Approaches with Emphasis on the Human Gut.人类病毒组与疾病:病毒发现的高通量测序、噬菌体-细菌失调的鉴定以及以人类肠道为重点的治疗方法的开发。
Viruses. 2019 Jul 18;11(7):656. doi: 10.3390/v11070656.
2
High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach.高通量测序的多富集方法研究人类癌症中的病毒。
J Infect Dis. 2019 Sep 13;220(8):1312-1324. doi: 10.1093/infdis/jiz318.
3
Global Increasing Incidence of Young-Onset Colorectal Cancer Across 5 Continents: A Joinpoint Regression Analysis of 1,922,167 Cases.
Sci Rep. 2024 Feb 3;14(1):2819. doi: 10.1038/s41598-024-53041-z.
4
The Archaeome's Role in Colorectal Cancer: Unveiling the DPANN Group and Investigating Archaeal Functional Signatures.古基因组在结直肠癌中的作用:揭示DPANN菌群并研究古菌功能特征
Microorganisms. 2023 Nov 10;11(11):2742. doi: 10.3390/microorganisms11112742.
5
The Underrated Gut Microbiota Helminths, Bacteriophages, Fungi, and Archaea.被低估的肠道微生物群:蠕虫、噬菌体、真菌和古菌
Life (Basel). 2023 Aug 18;13(8):1765. doi: 10.3390/life13081765.
6
Exploring the Relationship between the Gut Mucosal Virome and Colorectal Cancer: Characteristics and Correlations.探索肠道黏膜病毒组与结直肠癌之间的关系:特征与相关性
Cancers (Basel). 2023 Jul 9;15(14):3555. doi: 10.3390/cancers15143555.
7
Gut microbiota, an emergent target to shape the efficiency of cancer therapy.肠道微生物群,塑造癌症治疗疗效的一个新靶点。
Explor Target Antitumor Ther. 2023;4(2):240-265. doi: 10.37349/etat.2023.00132. Epub 2023 Apr 26.
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Human virome: Implications in cancer.人类病毒组:对癌症的影响
Heliyon. 2023 Mar;9(3):e14086. doi: 10.1016/j.heliyon.2023.e14086. Epub 2023 Feb 25.
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enteric viral interactions-The prostaglandin E connection and host immune responses.肠道病毒相互作用——前列腺素E联系与宿主免疫反应。
iScience. 2022 Dec 24;26(1):105870. doi: 10.1016/j.isci.2022.105870. eCollection 2023 Jan 20.
全球五大洲青年结直肠癌发病率不断上升:1922167 例病例的 Joinpoint 回归分析。
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mBio. 2018 Nov 20;9(6):e02248-18. doi: 10.1128/mBio.02248-18.