Department of Neurology and Centre for Clinical Neuroscience, Daping Hospital, Third Military Medical University, Chongqing, 400042, China.
Department of Anaesthesiology, Daping Hospital, Third Military Medical University, Chongqing, 400042, China.
Neurosci Bull. 2020 Jul;36(7):696-704. doi: 10.1007/s12264-020-00469-8. Epub 2020 Feb 18.
To evaluate whether the polygenic profile modifies the development of sporadic Alzheimer's disease (sAD) and pathological biomarkers in cerebrospinal fluid (CSF), 462 sAD patients and 463 age-matched cognitively normal (CN) controls were genotyped for 35 single-nucleotide polymorphisms (SNPs) that are significantly associated with sAD. Then, the alleles found to be associated with sAD were used to build polygenic risk score (PRS) models to represent the genetic risk. Receiver operating characteristic (ROC) analyses and the Cox proportional hazards model were used to evaluate the predictive value of PRS for the sAD risk and age at onset. We measured the CSF levels of Aβ42, Aβ42/Aβ40, total tau (T-tau), and phosphorylated tau (P-tau) in a subgroup (60 sAD and 200 CN participants), and analyzed their relationships with the PRSs. We found that 14 SNPs, including SNPs in the APOE, BIN1, CD33, EPHA1, SORL1, and TOMM40 genes, were associated with sAD risk in our cohort. The PRS models built with these SNPs showed potential for discriminating sAD patients from CN controls, and were able to predict the incidence rate of sAD and age at onset. Furthermore, the PRSs were correlated with the CSF levels of Aβ42, Aβ42/Aβ40, T-tau, and P-tau. Our study suggests that PRS models hold promise for assessing the genetic risk and development of AD. As genetic risk profiles vary among populations, large-scale genome-wide sequencing studies are urgently needed to identify the genetic risk loci of sAD in Chinese populations to build accurate PRS models for clinical practice.
为了评估多基因谱是否会改变散发性阿尔茨海默病(sAD)的发展和脑脊液(CSF)中的病理生物标志物,对 462 名 sAD 患者和 463 名年龄匹配的认知正常(CN)对照者进行了 35 个单核苷酸多态性(SNP)的基因分型,这些 SNP 与 sAD 显著相关。然后,使用与 sAD 相关的等位基因构建多基因风险评分(PRS)模型来代表遗传风险。使用接收器工作特征(ROC)分析和 Cox 比例风险模型来评估 PRS 对 sAD 风险和发病年龄的预测价值。我们在亚组(60 名 sAD 和 200 名 CN 参与者)中测量了 CSF 中的 Aβ42、Aβ42/Aβ40、总 tau(T-tau)和磷酸化 tau(P-tau)水平,并分析了它们与 PRSs 的关系。我们发现,包括 APOE、BIN1、CD33、EPHA1、SORL1 和 TOMM40 基因中的 14 个 SNP 与我们队列中的 sAD 风险相关。使用这些 SNP 构建的 PRS 模型显示出从 CN 对照者中区分 sAD 患者的潜力,并且能够预测 sAD 的发生率和发病年龄。此外,PRS 与 CSF 中的 Aβ42、Aβ42/Aβ40、T-tau 和 P-tau 水平相关。我们的研究表明,PRS 模型有望评估 AD 的遗传风险和发展。由于遗传风险谱在不同人群中存在差异,因此迫切需要进行大规模全基因组测序研究,以确定中国人群中 sAD 的遗传风险位点,为临床实践构建准确的 PRS 模型。