State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Xian Lie South Road 54#, Guangzhou 510060, China.
School of Computer Science and Technology, Xidian University, Tai Bai South Road 2#, Xi'an 710000, China.
Gigascience. 2020 Feb 1;9(2). doi: 10.1093/gigascience/giaa011.
Color vision is the ability to detect, distinguish, and analyze the wavelength distributions of light independent of the total intensity. It mediates the interaction between an organism and its environment from multiple important aspects. However, the physicochemical basis of color coding has not been explored completely, and how color perception is integrated with other sensory input, typically odor, is unclear.
Here, we developed an artificial intelligence platform to train algorithms for distinguishing color and odor based on the large-scale physicochemical features of 1,267 and 598 structurally diverse molecules, respectively. The predictive accuracies achieved using the random forest and deep belief network for the prediction of color were 100% and 95.23% ± 0.40% (mean ± SD), respectively. The predictive accuracies achieved using the random forest and deep belief network for the prediction of odor were 93.40% ± 0.31% and 94.75% ± 0.44% (mean ± SD), respectively. Twenty-four physicochemical features were sufficient for the accurate prediction of color, while 39 physicochemical features were sufficient for the accurate prediction of odor. A positive correlation between the color-coding and odor-coding properties of the molecules was predicted. A group of descriptors was found to interlink prominently in color and odor perceptions.
Our random forest model and deep belief network accurately predicted the colors and odors of structurally diverse molecules. These findings extend our understanding of the molecular and structural basis of color vision and reveal the interrelationship between color and odor perceptions in nature.
颜色视觉是一种独立于总强度检测、区分和分析光的波长分布的能力。它从多个重要方面介导了生物体与其环境之间的相互作用。然而,颜色编码的物理化学基础尚未被完全探索,颜色感知如何与其他感官输入(通常是气味)整合也不清楚。
在这里,我们开发了一个人工智能平台,该平台可基于 1267 种结构多样的分子和 598 种结构多样的分子的大规模物理化学特征,分别训练用于区分颜色和气味的算法。随机森林和深度置信网络在颜色预测方面的预测准确率分别为 100%和 95.23%±0.40%(均值±SD)。随机森林和深度置信网络在气味预测方面的预测准确率分别为 93.40%±0.31%和 94.75%±0.44%(均值±SD)。准确预测颜色需要 24 个物理化学特征,而准确预测气味需要 39 个物理化学特征。预测到分子的颜色编码和气味编码特性之间存在正相关。发现一组描述符在颜色和气味感知中紧密相关。
我们的随机森林模型和深度置信网络准确地预测了结构多样的分子的颜色和气味。这些发现扩展了我们对颜色视觉的分子和结构基础的理解,并揭示了自然界中颜色和气味感知之间的相互关系。