Hu Xinling, Zhang Lisha, Wilson Iain, Shao Fenjuan, Qiu Deyou
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, The Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
PeerJ. 2020 Feb 17;8:e8473. doi: 10.7717/peerj.8473. eCollection 2020.
The MYB transcription factor family is one of the largest gene families playing regulatory roles in plant growth and development. The MYB family has been studied in a variety of plant species but has not been reported in . Here we identified 72 putative R2R3-MYB genes in using a comprehensive analysis. Sequence features, conversed domains and motifs were characterized. The phylogenetic analysis showed TcMYBs and AtMYBs were clustered into 36 subgroups, of which 24 subgroups included members from and , while 12 subgroups were specific to one species. This suggests the conservation and specificity in structure and function of plant R2R3-MYBs. The expression of in various tissues and different ages of xylem were investigated. Additionally, miRNA-mediated posttranscriptional regulation analysis revealed that were the targets of miR858, miR159 and miR828, suggesting the posttranscriptional regulation of MYBs is highly conserved in plants. The results provide a basis for further study the role of in the regulation of secondary metabolites of .
MYB转录因子家族是在植物生长发育中发挥调控作用的最大基因家族之一。MYB家族已在多种植物物种中得到研究,但尚未在[具体物种]中报道。在此,我们通过全面分析在[具体物种]中鉴定出72个假定的R2R3-MYB基因。对其序列特征、保守结构域和基序进行了表征。系统发育分析表明,TcMYBs和AtMYBs被聚类为36个亚组,其中24个亚组包含来自[具体物种1]和[具体物种2]的成员,而12个亚组是一个物种所特有的。这表明植物R2R3-MYBs在结构和功能上具有保守性和特异性。研究了[具体物种]中[具体基因]在不同组织和不同年龄木质部中的表达。此外,miRNA介导的转录后调控分析表明,[具体基因]是miR858、miR159和miR828的靶标,这表明MYBs的转录后调控在植物中高度保守。这些结果为进一步研究[具体基因]在[具体物种]次生代谢物调控中的作用提供了基础。